JBrowse 2 genome browser hubs

180 accessions

Taxonomy:

root › Viruses › Riboviria › Orthornavirae › Kitrinoviricota › Flasuviricetes

Taxonomy information:

View on NCBI (taxonomy ID: 2732462)

Orthoflavivirus kyasanurense

Kyasanur Forest disease virus

•Kyasanur Forest disease virus(Kyasanur Forest disease virus (2018))(info)GCF_002820625.1

•Alkhumra hemorrhagic fever virus(Alkhumra hemorrhagic fever virus (Zaki #2 2012))(info)GCA_031116565.1

Orthoflavivirus powassanense

Powassan virus

•Powassan virus(Powassan virus (LB 1993))(info)GCF_000860485.1

•Deer tick virus(Deer tick virus (ctb30 CT95 2001))(info)GCA_004786555.1

Orthoflavivirus denguei

Dengue virus

•dengue virus type 1(Dengue virus 1 (clone 45AZ5 Nauru Island 1997))(info)GCF_000862125.1

•dengue virus type 2(Dengue virus 2 (16681/84 Thailand 1993))(info)GCF_000871845.1

dengue virus type 3

•dengue virus type 3(Dengue virus 3 (D3/H/IMTSSA-SRI/2000/1266 Sri Lanka 2007))(info)GCF_000866625.1

•dengue virus type 3(Dengue virus type 3 (H87 2023))(info)GCA_004788295.1

dengue virus type 4

•dengue virus type 4(Dengue virus 4 (clone rDEN4 2001))(info)GCF_000865065.1

•dengue virus type 4(Dengue virus type 4 (814669 2023))(info)GCA_004786575.1

Orthoflavivirus japonicum

•Japanese encephalitis virus(Japanese encephalitis virus (1993))(info)GCF_000862145.1

Orthoflavivirus nilense

West Nile virus

•West Nile virus(West Nile virus (956 1993))(info)GCF_000861085.1

•West Nile virus(West Nile virus (NY99 385-99 2007))(info)GCF_000875385.1

•Kunjin virus(Kunjin virus (MRM61C 2023))(info)GCA_004786635.1

Orthoflavivirus langatense

•Langat virus(Langat virus (TP21 2000))(info)GCF_000860805.1

Orthoflavivirus loupingi

•Louping ill virus(Louping ill virus (369/T2 1997))(info)GCF_000863165.1

Orthoflavivirus murrayense

•Murray Valley encephalitis virus(Murray Valley encephalitis virus (1999))(info)GCF_000863565.1

Orthoflavivirus omskense

•Omsk hemorrhagic fever virus(Omsk hemorrhagic fever virus (Bogoluvovska 2003))(info)GCF_000855505.1

Orthoflavivirus louisense

•St. Louis encephalitis virus(Saint Louis encephalitis virus (Kern217 2005))(info)GCF_000866785.1

Orthoflavivirus encephalitidis

Tick-borne encephalitis virus

•Tick-borne encephalitis virus(Tick-borne encephalitis virus (2000))(info)GCF_000863125.1

•Tick-borne encephalitis virus(Tick-borne encephalitis virus (Vasilchenko 2023))(info)GCA_004788235.1

Orthoflavivirus wesselsbronense

•Wesselsbron virus(Wesselsbron virus (SAH177 2009))(info)GCF_000883915.1

Orthoflavivirus flavi

•Yellow fever virus(Yellow fever virus (17D vaccine strain 1986))(info)GCF_000857725.1

Orthoflavivirus zikaense

Zika virus

•Zika virus(Zika virus (MR 766 2009))(info)GCF_000882815.3

•Zika virus(Zika virus (Natal RGN 2017))(info)GCF_002366285.1

unclassified Orthoflavivirus

•Aedes flavivirus(Aedes flavivirus (Narita-21 2009))(info)GCF_000885715.1

•Cell fusing agent virus(Cell fusing agent virus (Galveston 2016))(info)GCF_000862225.3

•Chaoyang virus(Chaoyang virus (HLD115 2012))(info)GCF_000895475.1

•Culex flavivirus(Culex flavivirus (Tokyo 2008))(info)GCF_000869605.1

•Culex theileri flavivirus(Culex theileri flavivirus (JKT-8650 2019))(info)GCF_004130945.1

•Donggang virus(Donggang virus (DG0909 2012))(info)GCF_000894455.1

•Hanko virus(Hanko virus (2016))(info)GCF_001678195.1

•Kama virus(Kama virus (LEIV-20776Tat 2014))(info)GCF_000915395.1

•Kamiti River virus(Kamiti River virus (SR-82 2003))(info)GCF_000851165.1

•Kampung Karu virus(Kampung Karu virus (SWK_P44 2019))(info)GCF_004130295.1

•Mercadeo virus(Mercadeo virus (ER-M10 2015))(info)GCF_001293015.1

Quang Binh virus

•Quang Binh virus(Quang Binh virus (VN180 2009))(info)GCF_000882915.1

•Mosquito flavivirus(Mosquito flavivirus (LSFlaviV-A20-09 2013))(info)GCF_000906355.1

•Nanay virus(Nanay virus (PRD316/PER/09 2019))(info)GCF_004130905.1

•Nounane virus(Nounane virus (Nounane_B3 2017))(info)GCF_002003995.1

•Ochlerotatus caspius flavivirus(Ochlerotatus caspius flavivirus (1608 2017))(info)GCF_002116075.1

•Palm Creek virus(Palm Creek virus (56 2017))(info)GCF_002003815.1

•Paraiso Escondido virus(Paraiso Escondido virus (Ecuador2012 2015))(info)GCF_001310195.1

•Parramatta River virus(Parramatta River virus (92-B115745 2015))(info)GCF_001292895.1

•Spanish goat encephalitis virus(Spanish goat encephalitis virus (AstGoatIREC2011 2015))(info)GCF_001271035.1

•T'Ho virus(T'Ho virus (T'Ho-Mex07 2017))(info)GCF_002117755.1

•Tamana bat virus(Tamana bat virus (2002))(info)GCF_000861685.1

Orthoflavivirus apoiense

•Apoi virus(Apoi virus (ApMAR 2002))(info)GCF_000863285.1

Orthoflavivirus aroaense

•Aroa virus(Aroa (Bussuquara virus BeAn 4073 2009))(info)GCF_000872985.1

Orthoflavivirus bagazaense

•Bagaza virus(Bagaza virus (DakAr B209 2009))(info)GCF_000883735.1

Orthoflavivirus banziense

•Banzi virus(Banzi virus (SAH 336 2019))(info)GCF_002820485.1

Orthoflavivirus boubouiense

•Bouboui virus(Bouboui virus (DAK AR B490 2017))(info)GCF_002004955.1

Orthoflavivirus bukalasaense

•Bukalasa bat virus(Bukalasa bat virus (UGBP-111 2019))(info)GCF_002820505.1

Orthoflavivirus cacipacoreense

•Cacipacore virus(Cacipacore virus (BeAn 3276000 2015))(info)GCF_000954535.1

Orthoflavivirus careyense

•Carey Island virus(Carey Island virus (P70-1215 2019))(info)GCF_002820525.1

Orthoflavivirus cowboneense

•Cowbone Ridge virus(Cowbone Ridge virus (W-10986 2019))(info)GCF_002820545.1

Orthoflavivirus dakarense

•Dakar bat virus(Dakar bat virus (209 2019))(info)GCF_002820565.1

Orthoflavivirus edgehillense

•Edge Hill virus(Edge Hill virus (YMP 48 2016))(info)GCF_001661755.1

Orthoflavivirus entebbeense

•Entebbe bat virus(Entebbe bat virus (UgIL-30 2006))(info)GCF_000870345.1

•Sokoluk virus(Sokoluk virus (LEIV-400K 2015))(info)GCF_000955255.1

Orthoflavivirus gadgetsense

•Gadgets Gully virus(Gadgets Gully virus (2017))(info)GCF_002003975.1

Orthoflavivirus ilheusense

Ilheus virus

•Ilheus virus(Ilheus virus (Original 2010))(info)GCF_000870465.1

•Rocio virus(Rocio virus (SPH 34675 2019))(info)GCF_004128575.1

Orthoflavivirus israelense

•Israel turkey meningoencephalomyelitis virus(Israel turkey meningoencephalomyelitis virus (2019))(info)GCF_002820585.1

Orthoflavivirus jugraense

•Jugra virus(Jugra virus (P-9-314 2017))(info)GCF_002004595.1

Orthoflavivirus jutiapaense

•Jutiapa virus(Jutiapa virus (JG-128 2015))(info)GCF_000955135.1

Orthoflavivirus kadamense

•Kadam virus(Kadam virus (2017))(info)GCF_002004935.1

Orthoflavivirus kedougouense

•Kedougou virus(Kedougou virus (DakAar D1470 2009))(info)GCF_000884715.1

Orthoflavivirus kokoberaorum

Kokobera virus

•Kokobera virus(Kokobera virus (AusMRM 32 2010))(info)GCF_002365985.1

•New Mapoon virus(New Mapoon virus (CY1014 2016))(info)GCF_000868845.2

Orthoflavivirus koutangoense

•Koutango virus(Koutango virus (Dak Ar D1470 2019))(info)GCF_002820605.1

Orthoflavivirus meabanense

•Meaban virus(Meaban virus (2017))(info)GCF_002004975.1

Orthoflavivirus modocense

•Modoc virus(Modoc virus (M544 2002))(info)GCF_000860905.1

Orthoflavivirus montanaense

•Montana myotis leukoencephalitis virus(Montana myotis leukoencephalitis virus (2002))(info)GCF_000861705.1

Orthoflavivirus ntayaense

•Ntaya virus(Ntaya virus (IPDIA 2013))(info)GCF_000897715.1

Orthoflavivirus phnompenhense

Phnom Penh bat virus

•Phnom Penh bat virus(Phnom Penh bat virus (30834_A38 2017))(info)GCF_002022195.1

•Phnom Penh bat virus(Phnom Penh bat virus (CAMA-38D 2023))(info)GCF_002820665.1

Orthoflavivirus saboyaense

Saboya virus

•Saboya virus(Saboya virus (Dak AR D4600 2017))(info)GCF_002004615.1

•Potiskum virus(Potiskum virus (IBAN 10069 2017))(info)GCF_001754105.2

Orthoflavivirus bravoense

•Rio Bravo virus(Rio Bravo virus (RiMAR 2002))(info)GCF_000862425.1

Orthoflavivirus royalense

•Royal Farm virus(Royal Farm virus (2018))(info)GCF_002820685.1

Orthoflavivirus viejaense

•Sal Vieja virus(Sal Vieja virus (38TWM-106 2019))(info)GCF_002820705.1

Orthoflavivirus perlitaense

•San Perlita virus(San Perlita virus (71V-1251 2019))(info)GCF_002820725.1

Orthoflavivirus saumarezense

•Saumarez Reef virus(Saumarez Reef virus (2017))(info)GCF_002004315.1

Orthoflavivirus sepikense

•Sepik virus(Sepik virus (MK7148 2006))(info)GCF_000868725.1

Orthoflavivirus tembusu

•Tembusu virus(Tembusu virus (JS804 2012))(info)GCF_000894755.1

Orthoflavivirus tyuleniyense

•Tyuleniy virus(Tyuleniy virus (LEIV-6C 2014))(info)GCF_000914295.1

Orthoflavivirus ugandaense

•Uganda S virus(Uganda S virus (2017))(info)GCF_002004295.1

Orthoflavivirus usutuense

•Usutu virus(Usutu virus (Vienna 2001 2004))(info)GCF_000854945.1

Orthoflavivirus yaoundeense

Yaounde virus

•Yaounde virus(Yaounde virus (Dak Ar Y276 2017))(info)GCF_002022175.1

•Yaounde virus(Yaounde virus (DakArY 276 2023))(info)GCF_002820745.1

Orthoflavivirus yokoseense

•Yokose virus(Yokose virus (Oita 36 2003))(info)GCF_000858665.1

Pegivirus

Pegivirus hominis

•GB virus C(GB virus C (1996))(info)GCF_000862005.1

Pegivirus columbiaense

•Human hepegivirus(human hepegivirus (AK-790 2018))(info)GCF_002821385.1

•Human pegivirus 2(human pegivirus 2 (UC0125.US 2015))(info)GCF_001310135.2

unclassified Pegivirus

Pegivirus platyrrhini

•Pegivirus platyrrhini(Pegivirus platyrrhini (2000))(info)GCF_000847425.1

•Pegivirus platyrrhini(Pegivirus platyrrhini (2023))(info)GCF_002821105.1

•Simian pegivirus(Simian pegivirus (SPgVkrc SPgVkrc_RC08 2014))(info)GCF_000921975.1

•Norway rat pegivirus(Norway rat pegivirus (NrPgV/NYC-E13 2014))(info)GCF_000929635.1

Pegivirus caballi

Equine pegivirus

•Equine pegivirus 1(Equine pegivirus 1 (C0035 2013))(info)GCF_000904655.1

Pegivirus pteropi

•GB virus-D(GB virus-D (68 2016))(info)GCF_001661855.1

•Pegivirus carolliae(Pegivirus carolliae (PDB-1698 2018))(info)GCF_002821345.1

•Pegivirus scotophili(Pegivirus scotophili (PDB-620 2018))(info)GCF_002821365.1

•Pegivirus sturnirae(Pegivirus sturnirae (PDB-1715 2018))(info)GCF_002821405.1

•Pegivirus suis(Pegivirus suis (PPgV_903/Ger/2013 2017))(info)GCF_002118605.1

Pegivirus neotomae

•Rodent pegivirus(Rodent pegivirus (CC61 2013))(info)GCF_000907255.1

Hepacivirus

Hepacivirus platyrrhini

•Hepacivirus platyrrhini(Hepacivirus platyrrhini (2018))(info)GCF_002820785.1

•GB virus-B(GB virus-B (2000))(info)GCF_000862405.1

Hepacivirus hominis

•Hepatitis C virus genotype 3(Hepatitis C virus genotype 3 (NZL1 2007))(info)GCF_000874285.1

•Hepatitis C virus genotype 4(Hepatitis C virus genotype 4 (ED43 2007))(info)GCF_000874265.1

•Hepatitis C virus genotype 5(Hepatitis C virus genotype 5 (EUH1480 2007))(info)GCF_000873605.1

•Hepatitis C virus genotype 7(Hepatitis C virus genotype 7 (QC69 2016))(info)GCF_001712785.1

hepatitis C virus genotype 1a

Hepatitis C virus

•Hepatitis C virus

[GCF_002820805.1|63746]

•isolate H77

{63746}

•isolate H77

•Hepatitis C virus genotype 1(Hepatitis C virus genotype 1 (H77 1997))(info)GCF_000861845.1

•Hepatitis C virus genotype 2(Hepatitis C virus genotype 2 (HC-J6CH 2007))(info)GCF_000871165.1

•Hepatitis C virus genotype 6(Hepatitis C virus genotype 6 (Th580 2007))(info)GCF_000872025.1

unclassified Hepacivirus

•Bat hepacivirus(Bat hepacivirus (PDB-452 2016))(info)GCF_001882015.3

Equine hepacivirus

•Equine hepacivirus JPN3/JAPAN/2013(Equine hepacivirus JPN3/JAPAN/2013 (JPN3 2014))(info)GCF_000922575.1

•Hepacivirus P(Hepacivirus P (RHV-GS2015 2019))(info)GCF_004132385.1

•Rodent hepacivirus(Rodent hepacivirus (RHV-339 2013))(info)GCF_000904775.1

•Wenling shark virus(Wenling shark virus (MHS-2 2015))(info)GCF_001444125.1

Hepacivirus bovis

•Hepacivirus bovis(Hepacivirus bovis (BovHepV_463/Ger/2014 2018))(info)GCF_002821085.1

•Bovine hepacivirus(Bovine hepacivirus (GHC25 2015))(info)GCF_000972615.1

Hepacivirus colobi

Guereza hepacivirus

•Guereza hepacivirus(Guereza hepacivirus (GHV-1 BWC08 2023))(info)GCF_002820965.1

•Guereza hepacivirus(Guereza hepacivirus (GHV-2 BWC04 2016))(info)GCF_001885465.1

•Hepacivirus glareoli(Hepacivirus glareoli (Hepacivirus/RMU10-3382/GER/2010 2018))(info)GCF_002821025.1

•Hepacivirus macronycteridis(Hepacivirus macronycteridis (PDB-829 2018))(info)GCF_002821045.1

•Hepacivirus myodae(Hepacivirus myodae (Hepacivirus/NLR07-oct70/NEL/2007 2018))(info)GCF_002820985.1

•Hepacivirus otomopis(Hepacivirus otomopis (PDB-491.1 2018))(info)GCF_002821065.1

•Hepacivirus rhabdomysis(Hepacivirus rhabdomysis (Hepacivirus/SAR-3/RSA/2008 2018))(info)GCF_002821005.1

•Hepacivirus vittatae(Hepacivirus vittatae (PDB-112 2016))(info)GCF_002375095.1

Hepacivirus equi

•Non-primate hepacivirus NZP1(Non-primate hepacivirus (NZP1 2018))(info)GCF_002820765.1

Hepacivirus ratti

•Norway rat hepacivirus 1(Norway rat hepacivirus 1 (NrHV-1/NYC-C12 2014))(info)GCF_000929615.1

Hepacivirus norvegici

•Norway rat hepacivirus 2(Norway rat hepacivirus 2 (NrHV-2/NYC-E43 2014))(info)GCF_000925175.1

unclassified Flaviviridae

Anopheles flavivirus Liberia/2013

•Anopheles flavivirus variant 1(Anopheles flavivirus variant 1 (2016))(info)GCF_001754965.1

•Apis flavivirus(Apis flavivirus (RI-A 2017))(info)GCF_002204045.1

•Bamaga virus(Bamaga virus (CY4270 2017))(info)GCF_002004915.1

•Culex Flavi-like virus(Culex Flavi-like virus (CFVL/San Francisco 2019))(info)GCF_004133645.1

•Culiseta flavivirus(Culiseta flavivirus (502-13 2016))(info)GCF_001661835.1

•Diatom colony associated ssRNA virus 1(Diatom colony associated ssRNA virus 1 (2019))(info)GCF_004128535.1

•Ilomantsi virus(Ilomantsi virus (M0724 2014))(info)GCF_000922535.1

Jingmenvirus group

Jingmen tick virus

•Jingmen tick virus(Jingmen tick virus (SY84 2014))(info)GCF_000919875.1

•Jingmen tick virus(Mogiana tick virus (MGTV/V4/11 2017))(info)GCF_002037735.1

•Shuangao insect virus 7(Shuangao insect virus 7 (SKC 2015))(info)GCF_001446205.1

•Wuhan aphid virus 1(Wuhan aphid virus 1 (WHYC-1 2015))(info)GCF_001444165.1

•Wuhan aphid virus 2(Wuhan aphid virus 2 (WHYC-2 2015))(info)GCF_001443945.1

•Wuhan cricket virus(Wuhan cricket virus (WHXS-1 2015))(info)GCF_001446225.1

•Wuhan flea virus(Wuhan flea virus (WHZM 2015))(info)GCF_001446245.1

•Karumba virus(Karumba virus (KRBV 1892 2017))(info)GCF_002210735.1

•Lammi virus(Lammi virus (Mekrijarvi 2007 M0719 2014))(info)GCF_000926135.1

•Lumpfish flavivirus(Lumpfish flavivirus (AL V-1216 2019))(info)GCF_004132105.1

•Mac Peak virus(Mac Peak virus (McPV 150840 2017))(info)GCF_002219825.1

•Macrosiphum euphorbiae virus 1(Macrosiphum euphorbiae virus 1 (K01 2015))(info)GCF_001430495.1

•Menghai flavivirus(Menghai flavivirus (MHAedFV1 2017))(info)GCF_002029595.1

•Nakiwogo virus(Nakiwogo virus (Uganda08 2016))(info)GCF_001678375.1

•Nhumirim virus(Nhumirim virus (BrMS-MQ10 2014))(info)GCF_000920675.1

•Nienokoue virus(Nienokoue virus (B51/CI/2004 2016))(info)GCF_000923535.2

•Soybean cyst nematode virus 5(Soybean cyst nematode virus 5 (ScV5 2014))(info)GCF_000918195.1

•Xishuangbanna aedes flavivirus(Xishuangbanna aedes flavivirus (XSBNAeFV 2017))(info)GCF_002022215.1

Pestivirus

Pestivirus scrofae

atypical porcine pestivirus

•Atypical porcine pestivirus 1(Atypical porcine pestivirus 1 (Bavaria S5/9 2016))(info)GCF_001695485.1

•Porcine pestivirus 1(Porcine pestivirus 1 (000515 2018))(info)GCF_003029075.1

Pestivirus aydinense

•Aydin-like pestivirus(Aydin-like pestivirus (Aydin/04-TR 2012))(info)GCF_000899315.1

Pestivirus S

•Bat pestivirus BtSk-PestV-1/GX2017(Bat pestivirus (BtSk-PestV-1/GX2017 2023))(info)GCF_029884225.1

Pestivirus ovis

•Border disease virus(Border disease virus (X818; Clover Lane 2002))(info)GCF_000862865.1

Pestivirus bovis

•Bovine viral diarrhea virus 1(Bovine viral diarrhea virus 1 (NADL 2000))(info)GCF_000861245.1

•Bovine viral diarrhea virus 1-SD1(Bovine viral diarrhea virus 1-SD1 (2023))(info)GCF_013088505.1

Pestivirus tauri

Bovine viral diarrhea virus 2

•Bovine viral diarrhea virus 2(Bovine viral diarrhea virus 2 (890 2018))(info)GCF_003029635.1

•Bovine viral diarrhea virus 2(Bovine viral diarrhea virus 2 (XJ-04 2023))(info)GCF_013088565.1

Pestivirus brazilense

•Bovine viral diarrhea virus 3 Th/04_KhonKaen(Bovine viral diarrhea virus 3 (Th/04_KhonKaen 2009))(info)GCF_000885615.1

Pestivirus suis

•Classical swine fever virus(Classical swine fever virus (strain Eystrup 2001))(info)GCF_000864685.1

•Classical swine fever virus - Alfort/187(Classical swine fever virus - (Alfort/187 2018))(info)GCF_003034095.1

Pestivirus P

•Dongyang pangolin virus(Dongyang pangolin virus (DYAJ1 2023))(info)GCF_029884905.1

Pestivirus L

•Linda virus(Linda virus (Austria1 2017))(info)GCF_002223795.1

unclassified Pestivirus

•Norway rat pestivirus(Norway rat pestivirus (NrPV/NYC-D23 2014))(info)GCF_000926015.1

•Pestivirus sp.(Pestivirus sp. (ovine/It/338710-3/2017 2023))(info)GCF_029884895.1

Rodent pestivirus

•Rodent pestivirus(Rodent pestivirus (RtAp-PestV/JL2014 2023))(info)GCF_029883675.1

•Rodent pestivirus(Rodent pestivirus (RtNn-PestV/HuB2014 2023))(info)GCF_029883705.1

Pestivirus giraffae

•Pestivirus giraffe-1 H138(Pestivirus (giraffe-1 H138 2002))(info)GCF_000852085.1

Pestivirus M

•Phocoena pestivirus(Phocoena pestivirus (NS170385 2023))(info)GCF_029884925.1

Pestivirus australiaense

•Porcine pestivirus isolate Bungowannah(Porcine pestivirus isolate (Bungowannah 2014))(info)GCF_000916775.1

Pestivirus antilocaprae

•Pronghorn antelope pestivirus(Pronghorn antelope pestivirus (2014))(info)GCF_000919835.1