207 accessions
Artemisiospiza belli(sage sparrow (canescens MVZ Bird 192114 alternate hap 2022))(info)GCA_021966175.1
Artemisiospiza belli(sage sparrow (canescens MVZ Bird 192114 primary hap 2022))(info)GCA_021963965.1
Passerculus sandwichensis(Savannah sparrow (primary hap 2023))(info)GCA_031885435.1
Passerculus sandwichensis alaudinus(Savannah sparrow (FMNH 499929 alternate hap 2022))(info)GCA_022578375.1
Passerculus sandwichensis alaudinus(Savannah sparrow (FMNH 499929 primary hap 2022))(info)GCA_022577445.1
Melospiza melodia(song sparrow (gouldii PMB2087b alternate hap 2022))(info)GCA_022749775.1
Melospiza melodia(song sparrow (gouldii PMB2087b primary hap 2022))(info)GCA_022749695.1
Melospiza melodia melodia(song sparrow (primary hap 2024 genbank))(info)GCA_035770615.1
Melospiza melodia melodia(song sparrow (primary hap 2024 refseq))(info)GCF_035770615.1
Melospiza georgiana(swamp sparrow (bMelGeo1 primary hap 2023 genbank))(info)GCA_028018845.1
Melospiza georgiana(swamp sparrow (bMelGeo1 alternate hap 2023))(info)GCA_028019105.1
Melospiza georgiana(swamp sparrow (bMelGeo1 primary hap 2023 refseq))(info)GCF_028018845.1
Ammospiza nelsoni(Nelson's sparrow (bAmmNel1 primary hap 2023 genbank))(info)GCA_027579445.1
Ammospiza nelsoni(Nelson's sparrow (bAmmNel1 alternate hap 2023))(info)GCA_027579665.1
Ammospiza nelsoni(Nelson's sparrow (bAmmNel1 primary hap 2023 refseq))(info)GCF_027579445.1
Ammospiza caudacuta(saltmarsh sparrow (bAmmCau1 alternate hap 2023))(info)GCA_027887135.1
Ammospiza caudacuta(saltmarsh sparrow (bAmmCau1 primary hap 2023 genbank))(info)GCA_027887145.1
Ammospiza caudacuta(saltmarsh sparrow (bAmmCau1 primary hap 2023 refseq))(info)GCF_027887145.1
Ammospiza maritima maritima(seaside sparrow (bAmmMar1 primary hap 2024))(info)GCA_036010785.1
Zonotrichia albicollis(white-throated sparrow (hap2 2025))(info)GCA_047774235.1
Zonotrichia albicollis(white-throated sparrow (hap1 2025))(info)GCA_047830755.1
Zonotrichia albicollis(white-throated sparrow (bZonAlb1hap1 2025))(info)GCF_047830755.1
Zonotrichia albicollis(white-throated sparrow (Tan morph 2013))(info)GCF_000385455.1
Zonotrichia leucophrys gambelii(bird Z.leucophrys gambelii (GWCS_2022_RI 2023))(info)GCF_028769735.1
Melozone crissalis(California towhee (CALT 2023))(info)GCF_028551555.1
Cyanocitta stelleri(Steller's jay (frontalis alternate hap 2022))(info)GCA_026168045.1
Cyanocitta stelleri(Steller's jay (frontalis primary hap 2022))(info)GCA_026167965.1
Cyanocitta cristata(blue jay (hap2 2024))(info)GCA_046129645.1
Cyanocitta cristata(blue jay (hap1 2024))(info)GCA_046129655.1
Aphelocoma californica(western scrub-jay (CA MVZ Bird 193978 2023))(info)GCA_028536645.1
Aphelocoma californica(western scrub-jay (CA MVZ Bird 193978 2023))(info)GCA_028536675.1
Aphelocoma coerulescens(scrub jay (FSJ_1873_10779 2024))(info)GCF_041296385.1
Corvus moneduloides(New Caledonian crow (alternate hap 2019))(info)GCA_009651025.1
Corvus moneduloides(New Caledonian crow (primary hap 2019))(info)GCF_009650955.1
Corvus hawaiiensis(Hawaiian crow (bCorHaw1 alternate hap 2021))(info)GCA_020740675.1
Corvus hawaiiensis(Hawaiian crow (primary hap 2021 refseq))(info)GCF_020740725.1
Corvus hawaiiensis(Hawaiian crow (2021 genbank))(info)GCA_020740725.1
Corvus brachyrhynchos(American crow)(info)GCF_000691975.1
Corvus cornix cornix(hooded crow (v6 S_Up_H32 2022))(info)GCF_000738735.6
Corvus cornix cornix(hooded crow (v2 S_Up_H32 2017))(info)GCF_000738735.2
Corvus cornix cornix(hooded crow (v5 S_Up_H32 2021))(info)GCF_000738735.5
Corvus kubaryi(Mariana crow)(info)GCF_017639235.1
Coloeus monedula(jackdaw (hap2.1 2025))(info)GCA_965178535.1
Coloeus monedula(jackdaw (hap1.1 2025))(info)GCA_965178545.1
Coloeus monedula(jackdaw (S_Up_J01 2020))(info)GCA_013407035.1
Lycocorax pyrrhopterus obiensis(Obi paradise-crow (lycPyr6 2020))(info)GCA_014706295.1
Agelaius tricolor(tricolored blackbird (1412-34295 alternate hap 2022))(info)GCA_023055385.1
Agelaius tricolor(tricolored blackbird (1412-34295 primary hap 2022 genbank))(info)GCA_023055355.1
Agelaius tricolor(tricolored blackbird (1412-34295 primary hap 2022 refseq))(info)GCF_023055355.1
Agelaius phoeniceus(red-winged blackbird (BioBank_ID:100140 2023))(info)GCF_020745825.1
Agelaius phoeniceus(red-winged blackbird (hap1 2025))(info)GCF_051311805.1
Molothrus aeneus(bronzed cowbird (106 2024))(info)GCF_037042795.1
Molothrus ater(brown headed cowbird (v1.1 BHLD 08-10-18 2022))(info)GCF_012460135.2
Molothrus ater(brown headed cowbird (v1.0 BHLD 08-10-18 2020))(info)GCF_012460135.1
Setophaga petechia(yellow warbler (LACM:Birds122168 alternate hap 2022))(info)GCA_024372515.1
Setophaga petechia(yellow warbler (LACM:Birds122168 primary hap 2022))(info)GCA_024362935.1
Geothlypis trichas(common yellowthroat (alternate hap 2019))(info)GCA_009764545.1
Geothlypis trichas(common yellowthroat (primary hap 2019))(info)GCA_009764595.1
Taeniopygia guttata(zebra finch (alternate hap Black17 2018))(info)GCA_003957525.1
Taeniopygia guttata(zebra finch (Black17 v1.4 alternate hap 2021))(info)GCA_003957525.2
Taeniopygia guttata(zebra finch (v1 Black17 male 2019 genbank))(info)GCA_003957565.2
Taeniopygia guttata(zebra finch (v1.4 Blue55 primary hap 2021 genbank))(info)GCA_003957565.4
Taeniopygia guttata(zebra finch (v3 Blue55 maternal 2020))(info)GCA_008822115.3
Taeniopygia guttata(zebra finch (Blue55 paternal 2019))(info)GCA_008822125.1
Taeniopygia guttata(zebra finch (alternate hap Blue55 v1 2020))(info)GCA_009859025.1
Taeniopygia guttata(zebra finch (Blue55 female 2020 genbank))(info)GCA_009859065.2
Taeniopygia guttata(zebra finch (bTaeGut7 maternal hap 2025))(info)GCA_048771995.1
Taeniopygia guttata(zebra finch (bTaeGut7 paternal hap 2025))(info)GCA_048772025.1
Taeniopygia guttata(zebra finch (v1 Black17 2019 refseq))(info)GCF_003957565.1
Taeniopygia guttata(zebra finch (v1.4 Blue55 female primary hap 2021 refseq))(info)GCF_003957565.2
Taeniopygia guttata(zebra finch (Blue55 paternal W 2020))(info)GCF_008822105.2
Taeniopygia guttata(zebra finch (2025))(info)GCF_048771995.1
Lonchura striata(white-rumped munia (maternal hap 2024))(info)GCA_046129695.1
Lonchura striata(white-rumped munia (paternal hap 2024))(info)GCA_046129705.1
Lonchura striata(Bengalese finch)(info)GCF_005870125.1
Lonchura striata(Bengalese finch (primary hap 2025))(info)GCA_050655825.1
Vidua chalybeata(village indigobird (purged dups hap OUT-0048 2022))(info)GCA_026979555.1
Vidua chalybeata(village indigobird (merged hap OUT-0048 2022 genbank))(info)GCA_026979565.1
Vidua chalybeata(village indigobird (merged hap OUT-0048 2022 refseq))(info)GCF_026979565.1
Vidua macroura(pin-tailed whydah (BioBank_ID:100142 2022))(info)GCF_024509145.1
Haemorhous mexicanus(house finch (bHaeMex1 alternate hap 2022))(info)GCA_027406555.1
Haemorhous mexicanus(house finch (primary hap 2022 genbank))(info)GCA_027477595.1
Haemorhous mexicanus(house finch (primary hap 2022 refseq))(info)GCF_027477595.1
Serinus canaria(common canary (domestic yellow sc_yellow_7_cibi 2019))(info)GCF_007115625.1
Serinus canaria(common canary (serCan28SL12 2022))(info)GCF_022539315.1
Fringilla coelebs(chaffinch (primary hap 2023))(info)GCA_963513975.1
Passer domesticus(house sparrow (hap1 2024 genbank))(info)GCA_036417665.1
Passer domesticus(house sparrow (hap2 2024))(info)GCA_036417895.1
Passer domesticus(house sparrow (hap1 2024 refseq))(info)GCF_036417665.1
Passer montanus(Eurasian tree sparrow)(info)GCF_014805655.1
Anomalospiza imberbis(bird A.imberbis (Cuckoo-Finch-1a 21T00152 2023))(info)GCF_031753505.1
Pyrgilauda ruficollis(rufous-necked snowfinch)(info)GCF_017590135.1
Onychostruthus taczanowskii(white-rumped snowfinch)(info)GCF_017590055.1
Motacilla alba alba(white wagtail)(info)GCF_015832195.1
Chamaea fasciata(wrentit (frontalis MVZ Bird 193981 alternate hap 2023))(info)GCA_029207785.1
Chamaea fasciata(wrentit (frontalis MVZ Bird 193981 primary hap 2023 genbank))(info)GCA_029207755.1
Chamaea fasciata(wrentit (frontalis MVZ Bird 193981 primary hap 2023 refseq))(info)GCF_029207755.1
Sylvia atricapilla(blackcap (primary hap 2019 genbank))(info)GCA_009819655.1
Sylvia atricapilla(blackcap (alternate hap 2019))(info)GCA_009819715.1
Sylvia atricapilla(blackcap (primary hap 2019 refseq))(info)GCF_009819655.1
Sylvia borin(garden warbler (primary hap 2020))(info)GCA_014839755.1
Sylvia borin(garden warbler (bSylBor1 alternate hap 2020))(info)GCA_014839765.1
Hirundo rustica(barn swallow (v3 primary hap 2021 genbank))(info)GCA_015227805.3
Hirundo rustica(Barn swallow (bHirRus1 v3 alternate hap 2021))(info)GCA_015227815.3
Hirundo rustica(barn swallow (v2 primary hap 2021 refseq))(info)GCF_015227805.1
Hirundo rustica(barn swallow (v3 primary hap 2021 refseq))(info)GCF_015227805.2
Hirundo rustica(barn swallow (bHirRus1 v2 primary hap genbank 2021))(info)GCA_015227805.2
Tachycineta bicolor(tree swallow (Ithaca 2401-50270 2024))(info)GCA_007636935.2
Zosterops lateralis(silver-eye (hap2.1 2025))(info)GCA_965231245.1
Zosterops lateralis(silver-eye (hap1.1 2025))(info)GCA_965231275.1
Prinia subflava(tawny-flanked prinia (Zambia CZ2003 2024))(info)GCF_021018805.1
Catharus ustulatus(Swainson's thrush (bCatUst1 v1 alternate hap 2019))(info)GCA_009819505.1
Catharus ustulatus(Swainson's thrush (bCatUst1 v2 alternate hap 2020))(info)GCA_009819505.2
Catharus ustulatus(Swainson's thrush (v1 primary hap 2019))(info)GCF_009819885.1
Catharus ustulatus(Swainson's thrush (v2 primary hap 2020))(info)GCF_009819885.2
Erithacus rubecula(European robin (alternate hap 2021))(info)GCA_903797565.2
Erithacus rubecula(European robin (primary hap 2021))(info)GCA_903797595.2
Chiroxiphia lanceolata(lance-tailed manakin (alternate hap 2020))(info)GCA_009829205.1
Chiroxiphia lanceolata(lance-tailed manakin (2020))(info)GCF_009829145.1
Pseudopipra pipra(white-crowned manakin (hap1 2024 genbank))(info)GCA_036250125.1
Pseudopipra pipra(white-crowned manakin (hap2 2024))(info)GCA_036250135.1
Pseudopipra pipra(white-crowned manakin (hap1 2024 refseq))(info)GCF_036250125.1
Lepidothrix coronata(blue-crowned manakin)(info)GCF_001604755.1
Manacus vitellinus(golden-collared manakin)(info)GCF_001715985.3
Manacus candei(white-collared manakin (Guabito, Panama 608988 2022))(info)GCF_025592945.1
Neopelma chrysocephalum(saffron-crested tyrant-manakin)(info)GCF_003984885.1
Corapipo altera(white-ruffed manakin)(info)GCF_003945725.1
Pipra filicauda(wire-tailed manakin (2020))(info)GCF_003945595.2
Pipra filicauda(wire-tailed manakin (2018))(info)GCF_003945595.1
Acanthisitta chloris(rifleman (bAcaChl1 alternate hap 2021))(info)GCA_016880875.1
Acanthisitta chloris(rifleman (primary hap 2021))(info)GCA_016904835.1
Acanthisitta chloris(rifleman (BGI 2014))(info)GCF_000695815.1
Acridotheres tristis(common myna (bArcTri1 alternate hap 2023))(info)GCA_027559525.1
Acridotheres tristis(common myna (bArcTri1 primary hap 2023))(info)GCA_027559615.1
Sturnus vulgaris(common starling)(info)GCF_001447265.1
Poecile atricapillus(black-capped chickadee (hap2 2023))(info)GCA_030490855.1
Poecile atricapillus(black-capped chickadee (hap1 2023))(info)GCF_030490865.1
Cyanistes caeruleus(blue tit)(info)GCF_002901205.1
Parus major(great tit)(info)GCF_001522545.3
Pseudopodoces humilis(Tibetan ground-tit)(info)GCF_000331425.1
Willisornis vidua(Xingu scale-backed antbird (hap1 2024))(info)GCA_045364795.1
Willisornis vidua(Xingu scale-backed antbird (hap2 2024))(info)GCA_045364805.1
Pithys albifrons albifrons(white-plumed antbird (INPA30051 2025))(info)GCF_047495875.1
Cinclus cinclus(white-throated dipper (primary hap 2023 genbank))(info)GCA_963662255.1
Cinclus cinclus(white-throated dipper (primary hap 2023 refseq))(info)GCF_963662255.1
Oenanthe melanoleuca(Eastern black-eared wheatear (GR-GAL-2019-014 2023))(info)GCF_029582105.1
Ficedula albicollis(collared flycatcher)(info)GCF_000247815.1
Diglossa brunneiventris(black-throated flowerpiercer)(info)GCA_019023105.1
Geospiza fortis(medium ground-finch)(info)GCF_000277835.1
Camarhynchus parvulus(small tree finch (2019))(info)GCF_901933205.1
Camarhynchus parvulus(small tree finch (2020))(info)GCA_902806625.1
Malurus melanocephalus(red-backed fairy wren (Western Australia 2023))(info)GCF_030028575.1
Myiozetetes cayanensis(rusty-margined flycatcher (MyiCay16 2022))(info)GCF_022539395.1
Empidonax traillii(willow flycatcher)(info)GCF_003031625.1
Strigops habroptila(kakapo (Jane alternate hap 2019))(info)GCA_004011185.1
Strigops habroptila(kakapo (Jane v2 2020 genbank))(info)GCA_004027225.2
Strigops habroptila(kakapo (v2 Jane 2020 refseq))(info)GCF_004027225.2
Strigops habroptila(kakapo (Jane v1 2019))(info)GCF_004027225.1
Ara ararauna(blue-and-yellow macaw (hap2 2023))(info)GCA_028858555.1
Ara ararauna(blue-and-yellow macaw (hap1 2023))(info)GCA_028858755.1
Lathamus discolor(Swift parrot (hap2 2024))(info)GCA_037157625.1
Lathamus discolor(swift parrot (hap1 2024))(info)GCF_037157495.1
Amazona ochrocephala(yellow-crowned parrot (bAmaOch1hap2 2024))(info)GCA_039720425.1
Amazona ochrocephala(yellow-crowned parrot (bAmaOch1hap1 2024))(info)GCA_039720435.1
Amazona aestiva(blue-fronted amazon (AMXYW 2021))(info)GCA_017639355.1
Amazona aestiva(blue-fronted amazon (FVVF132 2015))(info)GCA_001420675.1
Amazona vittata(Puerto Rican parrot (LU 182127 2020))(info)GCA_000332375.2
Guaruba guarouba(golden parakeet (hap1 2024))(info)GCA_045345405.1
Guaruba guarouba(golden parakeet (hap2 2024))(info)GCA_045519325.1
Psittacula echo(Mauritius parakeet (alternate hap 2023))(info)GCA_963243765.1
Psittacula echo(Mauritius parakeet (primary hap 2023))(info)GCA_963264785.1
Pezoporus flaviventris(bird P.flaviventris (CSIRO_AGI_PZ_B2104156 2023))(info)GCF_033815535.1
Pezoporus wallicus(ground parrot (Strahan ANWC-B61680 2023))(info)GCF_028554395.1
Pezoporus occidentalis(night parrot (Australia 2023))(info)GCF_034315485.1
Neopsephotus bourkii(Bourke's parrot (Australia Nb327-2 2023))(info)GCF_033783945.1
Psittacus erithacus(grey parrot (MU2MI4XJKV 2020))(info)GCA_009867235.1
Anodorhynchus hyacinthinus(hyacinth macaw (LEKZKR9XQ3 2022))(info)GCA_009936445.2
Nestor notabilis(kea)(info)GCF_000696875.1
Myiopsitta monachus(monk parakeet)(info)GCA_017639245.1
Aratinga solstitialis(sun parakeet (2019))(info)GCA_902168055.1
Melopsittacus undulatus(budgerigar (maternal 2020))(info)GCA_012275265.1
Melopsittacus undulatus(budgerigar (paternal hap 2020))(info)GCA_012275275.1
Melopsittacus undulatus(budgerigar (maternal Z 2020 genbank))(info)GCA_012275295.1
Melopsittacus undulatus(budgerigar (maternal Z 2020 refseq))(info)GCF_012275295.1
Melopsittacus undulatus(budgerigar (v6.3 2021 WashU))(info)GCF_000238935.1
Cariama cristata(red-legged seriema (alternate hap 2019))(info)GCA_009819485.1
Cariama cristata(red-legged seriema (primary hap 2019))(info)GCA_009819825.1
Cariama cristata(red-legged seriema (BGI_N322 2014 BGI))(info)GCF_000690535.1
Falco rusticolus(gyrfalcon (bFalRus1 alternate hap 2020))(info)GCA_015220155.1
Falco rusticolus(gyrfalcon (primary hap 2020))(info)GCF_015220075.1
Falco naumanni(lesser kestrel (alternate hap 2021))(info)GCA_017639645.1
Falco naumanni(lesser kestrel (v1 2021))(info)GCF_017639655.1
Falco naumanni(lesser kestrel (v2 2021))(info)GCF_017639655.2
Falco cherrug(Saker falcon (bFalChe1 primary hap 2022 genbank))(info)GCA_023634085.1
Falco cherrug(Saker falcon (bFalChe1 alternate hap 2022))(info)GCA_023634115.1
Falco cherrug(Saker falcon (primary hap 2022 refseq))(info)GCF_023634085.1
Falco cherrug(Saker falcon (BGI 2013))(info)GCF_000337975.1
Falco peregrinus(peregrine falcon (bFalPer1 primary hap 2022 genbank))(info)GCA_023634155.1
Falco peregrinus(peregrine falcon (bFalPer1 alternate hap 2022))(info)GCA_023634185.1
Falco peregrinus(peregrine falcon (bFalPer1 primary hap 2022 refseq))(info)GCF_023634155.1
Falco peregrinus(peregrine falcon (BGI 2013))(info)GCF_000337955.1
Falco biarmicus(lanner falcon (bFalBia1 alternate hap 2022))(info)GCA_023634305.1
Falco biarmicus(lanner falcon (bFalBia1 primary hap 2022 genbank))(info)GCA_023638135.1
Falco biarmicus(lanner falcon (bFalBia1 primary hap 2022 refseq))(info)GCF_023638135.1
Falco punctatus(Mauritius kestrel (alternate hap 2023))(info)GCA_963210275.1
Falco punctatus(Mauritius kestrel (primary hap 2023))(info)GCA_963210335.1
Falco sparverius(American kestrel (FMNH 100283 2023))(info)GCA_034782035.1