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112 accessions

Taxonomy:

root › cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Osteoglossocephalai › Clupeocephala › Otomorpha › Ostariophysi

Taxonomy information:

View on NCBI (taxonomy ID: 32519)

•Gila orcuttii(arroyo chub (AC-1 alternate hap 2022))(info)GCA_026230005.1

•Gila orcuttii(arroyo chub (AC-1 primary hap 2022))(info)GCA_026230025.1

Siphateles

•Siphateles boraxobius(Borax Lake chub (OS27281-9 2025))(info)GCF_051911475.1

Leuciscinae

Scardinius

Scardinius erythrophthalmus

•Scardinius erythrophthalmus(rudd (Europe DD20220513a primary hap 2022))(info)GCA_024453875.1

•Scardinius erythrophthalmus(rudd (fScaEry2.hap1.1 2024))(info)GCA_964197995.1

Squalius

Squalius cephalus

•Squalius cephalus(European chub (primary hap 2023))(info)GCA_949319135.1

•Squalius cephalus(European chub (alternate hap 2023))(info)GCA_949319155.1

Rutilus

Rutilus rutilus

•Rutilus rutilus(roach minnow (alternate hap 2023))(info)GCA_951802655.1

•Rutilus rutilus(roach minnow (primary hap 2023))(info)GCA_951802725.1

Abramis

•Abramis brama(common bream (primary hap 2024))(info)GCA_963993115.1

Leuciscus

Leuciscus leuciscus

•Leuciscus leuciscus(common dace (hap1.1 2025))(info)GCA_965113295.1

•Leuciscus leuciscus(common dace (hap2.1 2025))(info)GCA_965113325.1

Pogonichthyinae

Cyprinella

Cyprinella venusta

•Cyprinella venusta(blacktail shiner (hap1 2024))(info)GCA_038021265.1

•Cyprinella venusta(blacktail shiner (hap2 2024))(info)GCA_038024135.1

Pimephales

•Pimephales promelas(fathead minnow)(info)GCF_016745375.1

Rhinichthys

Rhinichthys klamathensis

•Rhinichthys klamathensis goyatoka(western speckled dace (OS25496 2023))(info)GCF_029890125.1

Phoxininae

Phoxinus

Phoxinus phoxinus

•Phoxinus phoxinus(Eurasian minnow (primary hap 2023))(info)GCA_949152265.1

•Phoxinus phoxinus(Eurasian minnow (alternate hap 2023))(info)GCA_949152275.1

Gobionidae

Sarcocheilichthyinae

Rhinogobio

•Rhinogobio nasutus(bony fish R.nasutus (DBWJ_T2T 2025))(info)GCA_048301585.1

Pseudorasbora

•Pseudorasbora parva(stone moroko (DD20220531a primary hap 2022))(info)GCF_024679245.1

Gobioninae

Gobio

Gobio gobio

•Gobio gobio(gudgeon (primary hap 2023))(info)GCA_949357685.1

•Gobio gobio(gudgeon (alternate hap 2023))(info)GCA_949357705.1

•Danio rerio(zebrafish (WGS:CAHPTB02 2020))(info)GCA_903684855.2

•Danio rerio(zebrafish (WGS:CAHPTA01 2020))(info)GCA_903684865.1

•Danio rerio(zebrafish (fDanRer4 alternate hap 2022))(info)GCA_944039255.1

•Danio rerio(zebrafish (WGS:CALUEM01 primary hap 2022))(info)GCA_944039275.1

•Danio rerio(zebrafish (T5D 2021))(info)GCA_018400075.1

•Danio rerio(zebrafish (GRCz12tu Tuebingen 2025))(info)GCF_049306965.1

•Danio rerio(zebrafish GRCz11)(info)GCF_000002035.6

•Danio aesculapii(panther danio (primary hap 2020))(info)GCF_903798145.1

Danionella

Danionella cerebrum

•Danionella cerebrum(Danionella translucida (Bolton 2019))(info)GCA_007224835.1

•Danionella cerebrum(Danionella translucida (fDanTra1 2020))(info)GCA_903798025.1

•Barbus barbus(barbel (primary hap 2022))(info)GCA_936440315.1

•Barbus barbus(barbel (alternate hap 2022))(info)GCA_936446605.1

Cyprininae

Carassius

Carassius carassius

•Carassius carassius(crucian carp (alternate hap 2023))(info)GCA_963082795.1

•Carassius carassius(crucian carp (primary hap 2023 refseq))(info)GCF_963082965.1

•Carassius carassius(crucian carp (primary hap 2023 genbank))(info)GCA_963082965.1

•Carassius auratus(goldfish)(info)GCF_003368295.1

•Carassius gibelio(silver crucian carp (wild population from Czech Republic Cgi1373 2022))(info)GCF_023724105.1

Cyprinus

Cyprinus carpio

•Cyprinus carpio(common carp (SPL01 2021))(info)GCF_018340385.1

•Cyprinus carpio(common carp (2014))(info)GCF_000951615.1

•Cyprinus carpio carpio(common carp (R8XR3 2021))(info)GCA_905221575.1

Sinocyclocheilus

•Sinocyclocheilus grahami(golden-line barbel)(info)GCF_001515645.1

•Sinocyclocheilus rhinocerous(horned golden-line barbel)(info)GCF_001515625.1

•Sinocyclocheilus anshuiensis(Southwestern China cavefish)(info)GCF_001515605.1

Labeoninae

Garrini

Garra

•Garra rufa(doctor fish G.rufa (2025))(info)GCF_049309525.1

Labeonini

Labeo

•Labeo rohita(rohu (BAU-BD-2019 2022))(info)GCF_022985175.1

Smiliogastrinae

Puntigrus

•Puntigrus tetrazona(Sumatra barb)(info)GCF_018831695.1

Acrossocheilinae

Onychostoma

•Onychostoma macrolepis(Yangtze koukloug (SWU-2019 2020))(info)GCF_012432095.1

Xenocyprididae

Xenocypridinae

Ctenopharyngodon

•Ctenopharyngodon idella(grass carp (HZGC_01 2021))(info)GCF_019924925.1

Chanodichthys

•Chanodichthys erythropterus(predatory carp (Z2021 2022))(info)GCF_024489055.1

Megalobrama

•Megalobrama amblycephala(Wuchang bream)(info)GCF_018812025.1

•Barbatula barbatula(stone loach (primary hap 2022))(info)GCA_947034865.1

•Barbatula barbatula(stone loach (alternate hap 2022))(info)GCA_947034905.1

Triplophysa

•Triplophysa rosa(Chinese cavefish (2022))(info)GCF_024868665.1

•Triplophysa dalaica(Dalai köbertrulling (WHDGS20190420 2020))(info)GCF_015846415.1

Cobitidae

Cobitinae

Paramisgurnus

Paramisgurnus dabryanus

•Paramisgurnus dabryanus(bony fish P.dabryanus (BB 2023))(info)GCF_030506205.1

•Paramisgurnus dabryanus(pond loach (2024))(info)GCF_030506205.2

Misgurnus

Misgurnus anguillicaudatus

•Misgurnus anguillicaudatus(oriental weatherfish (BS_2022a 2023))(info)GCF_027580225.1

•Misgurnus anguillicaudatus(oriental weatherfish (2024))(info)GCF_027580225.2

Catostomoidei

Catostomidae

Myxocyprinus

•Myxocyprinus asiaticus(Chinese sucker (Aquarium Trade MX2 2022))(info)GCF_019703515.2

Xyrauchen

•Xyrauchen texanus(razorback sucker (HMW12.3.18 2022))(info)GCF_025860055.1

Electrophorus electricus

•Electrophorus electricus(electric eel (alternate hap 2020))(info)GCA_013347915.1

•Electrophorus electricus(electric eel (primary hap 2020 genbank))(info)GCA_013358815.1

•Electrophorus electricus(electric eel (QZ-2024a 2024))(info)GCA_041902795.1

•Electrophorus electricus(electric eel (primary hap 2020 refseq))(info)GCF_013358815.1

•Electrophorus electricus(electric eel (MRS-EE1 2018 U Wisconsin))(info)GCF_003665695.1

Sternopygoidei

Hypopomidae

Brachyhypopomus

•Brachyhypopomus gauderio(banded electric knifefish (BG-103 2025))(info)GCF_052324685.1

Pygocentrus nattereri

•Pygocentrus nattereri(red-bellied piranha (fPygNat1 alternate hap 2020))(info)GCA_015220065.1

•Pygocentrus nattereri(red-bellied piranha (primary hap 2020))(info)GCF_015220715.1

•Pygocentrus nattereri(red-bellied piranha (Pna-1 2016))(info)GCF_001682695.1

Colossoma

•Colossoma macropomum(tambaqui)(info)GCF_904425465.1

Erythrinidae

Hoplias

Hoplias malabaricus

•Hoplias malabaricus(trahira (v1 hap1 2023))(info)GCA_029633855.1

•Hoplias malabaricus(trahira (v2 hap1 2024 genbank))(info)GCA_029633855.2

•Hoplias malabaricus(trahira (v1 hap2 2023))(info)GCA_029633875.1

•Hoplias malabaricus(trahira (v2 hap2 2024))(info)GCA_029633875.2

•Hoplias malabaricus(trahira (v1 hap1 2024 refseq))(info)GCF_029633855.1

Bryconidae

Salmininae

Salminus

Salminus brasiliensis

•Salminus brasiliensis(dorado (hap1 2023))(info)GCA_030448965.1

•Salminus brasiliensis(dorado (hap2 2023 genbank))(info)GCA_030463535.1

•Salminus brasiliensis(dorado (hap2 2023 refseq))(info)GCF_030463535.1

•Astyanax mexicanus(Mexican tetra (ESR-SI-001 2022))(info)GCF_023375975.1

•Astyanax mexicanus(Mexican tetra (2017 WashU))(info)GCF_000372685.2

•Astyanax mexicanus(Mexican tetra (Pach_M1 Pachon cave 2021))(info)GCA_019721115.1

•Clarias gariepinus(North African catfish (Netherlands MV-2021 primary hap 2022))(info)GCA_024256435.1

•Clarias gariepinus(North African catfish (Netherlands MV-2021 alternate hap 2022))(info)GCA_024256465.1

•Clarias gariepinus(North African catfish (Netherlands MV-2021 2022))(info)GCF_024256425.1

•Clarias magur(walking catfish (CIFAMagur01 2020))(info)GCA_013621035.1

Pangasiidae

Pangasianodon

Pangasianodon hypophthalmus

•Pangasianodon hypophthalmus(striped catfish (fPanHyp1 alternate hap 2022))(info)GCA_027382375.1

•Pangasianodon hypophthalmus(striped catfish (primary hap 2022 refseq))(info)GCF_027358585.1

•Pangasianodon hypophthalmus(striped catfish Indonesia)(info)GCF_009078355.1

•Pangasianodon hypophthalmus(striped catfish Vietnam)(info)GCF_003671635.1

•Pangasianodon hypophthalmus(striped catfish (primary hap 2022 genbank))(info)GCA_027358585.1

Ariidae

Neoarius

Neoarius graeffei

•Neoarius graeffei(lesser salmon catfish (primary hap 2023 genbank))(info)GCA_027579695.1

•Neoarius graeffei(lesser salmon catfish (fNeoGra1 alternate hap 2023))(info)GCA_027579805.1

•Neoarius graeffei(lesser salmon catfish (primary hap 2023 refseq))(info)GCF_027579695.1

Siluridae

Silurus

Silurus aristotelis

•Silurus aristotelis(Aristotle's catfish (alternate hap 2022))(info)GCA_946807865.1

•Silurus aristotelis(Aristotle's catfish (primary hap 2022))(info)GCA_946808225.1

•Silurus meridionalis(Chinese large-mouth catfish (SWU-2019-XX 2020))(info)GCF_014805685.1

Bagridae

Hemibagrus

•Hemibagrus wyckioides(Asian redtail catfish (EC202008001 2021))(info)GCF_019097595.1

Tachysurus

•Tachysurus vachellii(bony fish T.vachellii (PV-2020 2023))(info)GCF_030014155.1

Tachysurus fulvidraco

•Tachysurus fulvidraco(yellow catfish (hzauxx_2018 2022))(info)GCF_022655615.1

•Tachysurus fulvidraco(yellow catfish (Tf-2017 2018))(info)GCF_003724035.1

Ictaluridae

Ictalurus

•Ictalurus furcatus(blue catfish (D&B 2022))(info)GCF_023375685.1

Ictalurus punctatus

•Ictalurus punctatus(channel catfish (USDA103 v2.0 2022))(info)GCF_001660625.3

•Ictalurus punctatus(channel catfish (USDA103 v1 2016))(info)GCF_001660625.1

•Ictalurus punctatus(channel catfish (USDA103 v1.2 2019))(info)GCF_001660625.2

Loricarioidei

Trichomycteridae

Trichomycterus

Trichomycterus rosablanca

•Trichomycterus rosablanca(Andian cavefish (hap1 2023 genbank))(info)GCA_030014385.1

•Trichomycterus rosablanca(Rosablanca catfish (hap2 2023))(info)GCA_030015355.1

•Trichomycterus rosablanca(Andian cavefish (hap1 2023 refseq))(info)GCF_030014385.1

Callichthyidae

Corydoras

unclassified Corydoras

•Corydoras sp. C115(Corydoras catfish unclassified (C115 2021))(info)GCA_019802505.1

•Chanos chanos(milkfish (alternate hap 2019))(info)GCA_902362175.1

•Chanos chanos(milkfish (2019))(info)GCF_902362185.1