JBrowse 2 genome browser hubs

28 accessions

Taxonomy:

root › cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Sciuromorpha › Sciuridae

Taxonomy information:

View on NCBI (taxonomy ID: 55153)

•Urocitellus parryii(Arctic ground squirrel (hap2 2024))(info)GCA_045843765.1

•Urocitellus parryii(Arctic ground squirrel (hap1 2024))(info)GCA_045843805.1

•Urocitellus parryii(Arctic ground squirrel (AGS 11-09-20 2018))(info)GCF_003426925.1

Marmota

Marmota flaviventris

•Marmota flaviventris(yellow-bellied marmot (hap1 2025 genbank))(info)GCA_047511675.1

•Marmota flaviventris(yellow-bellied marmot (hap2 2025))(info)GCA_047512175.1

•Marmota flaviventris(yellow-bellied marmot (hap1 2025 refseq))(info)GCF_047511675.1

•Marmota flaviventris(yellow-bellied marmot (SJ_83 v2.0 2019))(info)GCF_003676075.2

•Marmota flaviventris(yellow-bellied marmot (v1 2018))(info)GCF_003676075.1

•Marmota flaviventris(yellow-bellied marmot (SJ_83 v2.1 2019))(info)GCF_003676075.3

Marmota marmota

Marmota marmota marmota

•Marmota marmota marmota(Alpine marmot (2015))(info)GCF_001458135.1

•Marmota marmota marmota(Alpine marmot (2019))(info)GCF_001458135.2

Marmota monax

•Marmota monax(woodchuck (CNAG 2019))(info)GCA_901343595.1

•Marmota monax(woodchuck (v1.0 LI92 2021))(info)GCF_021218885.1

•Marmota monax(woodchuck (v1.1 L192 2022))(info)GCF_021218885.2

•Marmota vancouverensis(Vancouver Island marmot (RANI-1049 2019))(info)GCA_005458795.1

Callospermophilus

Callospermophilus lateralis

•Callospermophilus lateralis(golden-mantled ground squirrel (hap1 2025))(info)GCA_048772815.1

•Callospermophilus lateralis(golden-mantled ground squirrel (hap2 2025 genbank))(info)GCA_048772825.1

•Callospermophilus lateralis(golden-mantled ground squirrel (hap2 2025 refseq))(info)GCF_048772825.1

Spermophilus

•Spermophilus citellus(European suslik (primary hap 2024))(info)GCA_964194105.1

•Spermophilus dauricus(Daurian ground squirrel)(info)GCA_002406435.1

Ictidomys

Ictidomys tridecemlineatus

•Ictidomys tridecemlineatus(thirteen-lined ground squirrel (2011))(info)GCF_000236235.1

•Ictidomys tridecemlineatus(thirteen-lined ground squirrel (2021 HiC))(info)GCF_016881025.1

Xerini

Xerus

•Xerus inauris(South African ground squirrel)(info)GCA_004024805.1

•Sciurus carolinensis(gray squirrel (alternate hap 2019))(info)GCA_902685475.1

•Sciurus carolinensis(gray squirrel (2020))(info)GCF_902686445.1

Sciurus vulgaris

•Sciurus vulgaris(Eurasian red squirrel (alternate hap 2019))(info)GCA_902685485.1

•Sciurus vulgaris(Eurasian red squirrel (v1.1 2019))(info)GCA_902686455.1

•Sciurus vulgaris(Eurasian red squirrel (v1.2 2020))(info)GCA_902686455.2