jbrowse_logo
JBrowse 2 Genomes
Genomes
Demos
About
Looking for the JBrowse 2 homepage?
77 accessions
Taxonomy:
root
›
cellular organisms
›
Eukaryota
›
Viridiplantae
›
Streptophyta
›
Streptophytina
›
Embryophyta
›
Tracheophyta
›
Euphyllophyta
›
Spermatophyta
›
Magnoliopsida
›
Mesangiospermae
›
eudicotyledons
›
Gunneridae
›
Pentapetalae
›
asterids
Taxonomy information:
View on NCBI (taxonomy ID: 71274)
asterids
Ericales
Ericaceae
Arbutoideae
Arctostaphylos
Arctostaphylos glauca
•
Arctostaphylos glauca
(bigberry manzanita (GLNDR_RDG_Rd-6 primary hap 2022))
(info)
GCA_019985065.2
•
Arctostaphylos glauca
(bigberry manzanita (GLNDR_RDG_Rd-6 alternate hap 2021))
(info)
GCA_019985075.1
Ericoideae
Rhodoreae
Rhododendron
•
Rhododendron vialii
(Rhododendron vialii eudicots (Sample 1 2023))
(info)
GCF_030253575.1
Polemoniaceae
Linanthus
Linanthus parryae
•
Linanthus parryae
(sandblossoms (Phelan CA IGA184 alternate hap 2022))
(info)
GCA_023055565.1
•
Linanthus parryae
(sandblossoms (Phelan CA IGA184 primary hap 2022))
(info)
GCA_023055425.1
Actinidiaceae
Actinidia
Actinidia eriantha
•
Actinidia eriantha
(A. eriantha gooseberry (White 2019))
(info)
GCA_004150315.1
•
Actinidia eriantha
(A.eriantha eudicots (MHT-2021 2021))
(info)
GCF_019202715.1
Actinidia chinensis
•
Actinidia chinensis
(golden kiwifruit (Hongyang 2019))
(info)
GCA_009663005.1
•
Actinidia chinensis var. chinensis
(golden kiwifruit (Red5 2018))
(info)
GCA_003024255.1
Theaceae
Camellia
•
Camellia sinensis
(black tea)
(info)
GCF_004153795.1
Ebenaceae
Diospyros
•
Diospyros lotus
(date-plum (Yz01 2020))
(info)
GCF_014633365.1
Balsaminaceae
Impatiens
•
Impatiens glandulifera
(Himalayan balsam (dImpGla2.1 2021))
(info)
GCF_907164915.1
lamiids
Solanales
Solanaceae
Solanoideae
Capsiceae
Capsicum
Capsicum annuum
•
Capsicum annuum
(capsicum (Zunla-1 2015 genbank))
(info)
GCA_000710875.1
•
Capsicum annuum
(bell pepper eudicots (UCD-10X-F1 2018))
(info)
GCF_002878395.1
•
Capsicum annuum
(capsicum (Zunla-1 2015 refseq))
(info)
GCF_000710875.1
•
Capsicum chinense
(habanero-type pepper (PI159236 2017))
(info)
GCA_002271895.2
Solaneae
Solanum
Solanum subgen. Lycopersicon
Solanum lycopersicum
•
Solanum lycopersicum
(tomato (v3.0 Heinz 1706 2018))
(info)
GCF_000188115.4
•
Solanum lycopersicum
(tomato (2024))
(info)
GCF_036512215.1
•
Solanum lycopersicum
(tomato (v3.1 Heinz 1706 2018))
(info)
GCF_000188115.5
•
Solanum pennellii
(wild tomato S.pennellii)
(info)
GCF_001406875.1
•
Solanum dulcamara
(climbing nightshade (primary hap 2022))
(info)
GCF_947179165.1
•
Solanum virginianum
(eggplant (2014))
(info)
GCA_000787875.1
•
Solanum stenotomum
(potato S.stenotomum (F172 2021))
(info)
GCF_019186545.1
Solanum tuberosum
•
Solanum tuberosum
(potato S.tuberosum (alt pseudohaplotype RH89-039-16 2020))
(info)
GCA_014189305.1
•
Solanum tuberosum
(potato S.tuberosum (Dihaploid 'C-13' 2020))
(info)
GCA_010127505.1
•
Solanum tuberosum
(potato S.tuberosum (DM 1-3 516 R44 2011))
(info)
GCF_000226075.1
•
Solanum tuberosum
(potato S.tuberosum (hap 1 of 4 Otava Stieglitz 2021))
(info)
GCA_020169555.1
•
Solanum tuberosum
(potato S.tuberosum (hap 2 of 4 Otava Stieglitz 2021))
(info)
GCA_020169535.1
•
Solanum tuberosum
(potato S.tuberosum (hap 3 of 4 Otava Hera 2021))
(info)
GCA_020169585.1
•
Solanum tuberosum
(potato S.tuberosum (hap 4 of 4 Otava Hera 2021))
(info)
GCA_020169575.1
•
Solanum tuberosum
(potato S.tuberosum (RH89-039-16 2020))
(info)
GCA_014189475.1
•
Solanum verrucosum
(potato S.verrucosum (2019))
(info)
GCF_900185275.1
Lycieae
Lycium
•
Lycium ferocissimum
(African boxthorn (CSIRO_LF1 2023))
(info)
GCF_029784015.1
•
Lycium barbarum
(goji berry (Lr01 2021))
(info)
GCF_019175385.1
Nicotianoideae
Nicotianeae
Nicotiana
Nicotiana tabacum
•
Nicotiana tabacum
(common tobacco (K326 2023))
(info)
GCF_000715075.1
•
Nicotiana tabacum
(common tobacco (TN90 2014))
(info)
GCF_000715135.1
•
Nicotiana benthamiana
(eudicot N.benthamiana (KLAB 2023))
(info)
GCA_034376525.1
•
Nicotiana attenuata
(tobacco N.attenuata)
(info)
GCF_001879085.1
•
Nicotiana tomentosiformis
(tobacco N.tomentosiformis)
(info)
GCF_000390325.2
•
Nicotiana sylvestris
(wood tobacco)
(info)
GCF_000393655.1
Convolvulaceae
Ipomoeeae
Ipomoea
•
Ipomoea nil
(Japanese morning glory)
(info)
GCF_001879475.1
•
Ipomoea batatas
(sweet potato (Taizhong6 2017))
(info)
GCA_002525835.2
•
Ipomoea triloba
(trilobed morning glory)
(info)
GCF_003576645.1
Lamiales
Lamiaceae
Nepetoideae
Mentheae
Salviinae
Salvia
Salvia incertae sedis
•
Salvia hispanica
(chia eudicots (TCC Black 2014 2022))
(info)
GCF_023119035.1
•
Salvia miltiorrhiza
(red sage (Shanhuang shh 2023))
(info)
GCF_028751815.1
Salvia subgen. Calosphace
core Calosphace
Salvia splendens
•
Salvia splendens
(S.splendens huo1 eudicots (BFU 2021))
(info)
GCF_004379255.1
•
Salvia splendens
(scarlet sage (huo1 2021))
(info)
GCF_004379255.2
Lamioideae
Pogostemoneae
Pogostemon
•
Pogostemon cablin
(patchouli (Gaoche1L2016 2018))
(info)
GCA_003675935.1
Gesneriaceae
Didymocarpoideae
Trichosporeae
Didymocarpinae
Henckelia
•
Henckelia pumila
(eudicot H.pumila (YLH828 2023))
(info)
GCF_033568475.1
Primulina
•
Primulina eburnea
(eudicot P.eburnea (SZY01 2022))
(info)
GCF_022965805.1
•
Primulina huaijiensis
(eudicot P.huaijiensis (GDHJ02 2020))
(info)
GCF_012295235.1
•
Primulina tabacum
(Primulina tabacum (GXHZ01 2022))
(info)
GCF_025594145.1
Acanthaceae
Acanthoideae
Andrographideae
Andrographis
•
Andrographis paniculata
(green chiretta (2019))
(info)
GCF_009805555.1
Orobanchaceae
Orobanchaceae incertae sedis
Phtheirospermum
•
Phtheirospermum japonicum
(Phtheirospermum japonicum (okayama 2020))
(info)
GCA_014905375.1
Pedaliaceae
Sesamum
•
Sesamum indicum
(sesame)
(info)
GCF_000512975.1
Phrymaceae
Erythranthe
•
Erythranthe guttata
(spotted monkey flower)
(info)
GCF_000504015.1
Oleaceae
Oleeae
Olea
Olea europaea
Olea europaea subsp. europaea
•
Olea europaea var. sylvestris
(wild olive)
(info)
GCF_002742605.1
Gentianales
Rubiaceae
Ixoroideae
Gardenieae complex
Bertiereae - Coffeeae clade
Coffeeae
Coffea
Coffea arabica
•
Coffea arabica
(coffee C.arabica (CCC135-36 2018))
(info)
GCF_003713225.1
•
Coffea arabica
(coffee C.arabica (ET-39 2024))
(info)
GCF_036785885.1
•
Coffea eugenioides
(coffee C.eugenioides (CCC68of 2018))
(info)
GCF_003713205.1
Apocynaceae
Rauvolfioideae
Vinceae
Catharanthinae
Catharanthus
•
Catharanthus roseus
(Madagascar periwinkle (Sunstorm Apricot 2015))
(info)
GCA_000949345.1
campanulids
Asterales
Asteraceae
Cichorioideae
Cichorieae
Lactucinae
Lactuca
Lactuca sativa
•
Lactuca sativa
(eudicots lettuce (Salinas v7 2020))
(info)
GCF_002870075.2
•
Lactuca sativa
(lettuce (Salinas v7 2018))
(info)
GCF_002870075.1
•
Lactuca sativa
(lettuce (Salinas v8 2020))
(info)
GCF_002870075.3
•
Lactuca sativa
(garden lettuce (Salinas v11 2022))
(info)
GCF_002870075.4
•
Lactuca sativa
(lettuce eudicots (Salinas 2011))
(info)
GCA_000227445.1
Carduoideae
Cardueae
Carduinae
Cynara
Cynara cardunculus
Cynara cardunculus subsp. cardunculus
Cynara cardunculus var. scolymus
•
Cynara cardunculus var. scolymus
(globe artichoke (v1 2C 2018))
(info)
GCF_001531365.1
•
Cynara cardunculus var. scolymus
(globe artichoke (v1.1 2C 2018))
(info)
GCF_001531365.2
Asteroideae
Inuleae
Plucheinae
Rutidosis
•
Rutidosis leptorrhynchoides
(button wrinklewort R.leptorrhynchoides (AG116_Rl617_1_P2 2025))
(info)
GCF_046630445.1
Heliantheae alliance
Heliantheae
Helianthus
•
Helianthus annuus
(common sunflower)
(info)
GCF_002127325.2
Coreopsideae
Bidens
•
Bidens hawaiensis
(Hawaiian beggarticks (Kalapana, Puna primary hap 2024))
(info)
GCF_021521415.1
Astereae
North American clade
Conyzinae
Erigeron
•
Erigeron canadensis
(horseweed)
(info)
GCF_010389155.1
Anthemideae
Artemisiinae
Artemisia
•
Artemisia annua
(sweet wormwood (Huhao1# 2018))
(info)
GCA_003112345.1
Apiales
Apiineae
Apiaceae
Apioideae
Scandiceae
Daucinae
Daucus
Daucus sect. Daucus
Daucus carota
Daucus carota subsp. sativus
•
Daucus carota subsp. sativus
(carrot)
(info)
GCF_001625215.1
•
Daucus carota subsp. sativus
(carrot (DH1 2023))
(info)
GCF_001625215.2
apioid superclade
Apieae
Apium
•
Apium graveolens
(celery A.graveolens (Ventura 2021))
(info)
GCF_009905375.1
Cornales
Cornaceae
Cornus
•
Cornus florida
(flowering dogwood (Cherokee Brave 2023))
(info)
GCF_030987335.1