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177 accessions

Taxonomy:

root › cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliopsida › Mesangiospermae › eudicotyledons › Gunneridae › Pentapetalae › rosids

Taxonomy information:

View on NCBI (taxonomy ID: 71275)

•Populus trichocarpa(black cottonwood (Ptri.A.LA.226.w1 alternate hap 2023))(info)GCA_028534865.1

•Populus trichocarpa(black cottonwood (Ptri.A.LA.226.w1 primary hap 2023))(info)GCA_028534895.1

•Populus trichocarpa(black cottonwood (v3 Nisqually-1 2018))(info)GCF_000002775.4

•Populus trichocarpa(black cottonwood (v4.1 Nisqually-1 2022))(info)GCF_000002775.5

Populus euphratica

•Populus euphratica(Euphrates poplar (v1 2014))(info)GCF_000495115.1

•Populus euphratica(Euphrates poplar (v2 2014))(info)GCF_000495115.2

•Populus nigra(eudicot P.nigra (primary hap 2023))(info)GCF_951802175.1

Populus alba

•Populus alba(silver poplar)(info)GCF_005239225.1

•Populus alba(white poplar (2024))(info)GCF_005239225.2

Populus alba x Populus glandulosa

•Populus alba x Populus glandulosa(white poplar P.alba x Populus glandulosa (maternal hap 84K 2023))(info)GCA_033621325.1

•Populus alba x Populus glandulosa(white poplar P.alba x Populus glandulosa (paternal hap 84K 2023))(info)GCA_033617975.1

•Manihot esculenta(cassava (v6 AM560-2 2016 DOE))(info)GCF_001659605.1

•Manihot esculenta(cassava (60444 2018))(info)GCA_003957885.1

•Manihot esculenta(cassava (v8 AM560-2 2021 DOE))(info)GCF_001659605.2

Jatropheae

Jatropha

•Jatropha curcas(Barbados nut)(info)GCF_014843425.1

Micrandreae

Hevea

Hevea brasiliensis

•Hevea brasiliensis(rubber tree (MT/VB/25A 57/8 2023))(info)GCF_030052815.1

•Hevea brasiliensis(rubber tree (reyan7-33-97 2016))(info)GCF_001654055.1

•Mercurialis annua(annual mercury (v1 primary hap 2022))(info)GCF_937616625.1

•Mercurialis annua(annual mercury (v2 primary hap 2022))(info)GCF_937616625.2

Ricinus

Ricinus communis

•Ricinus communis(castor bean (Hale 2011 JCVI))(info)GCF_000151685.1

•Ricinus communis(castor bean (wild-type WT05 2021))(info)GCF_019578655.1

Euphorbioideae

Euphorbieae

Euphorbia

Euphorbia subgen. Esula

Euphorbia sect. Lathyris

•Euphorbia lathyris(eudicot E.lathyris (primary hap 2023))(info)GCF_963576675.1

•Juglans californica(California black walnut (Jcal.S.LA.6 alternate hap 2022))(info)GCA_023349545.1

•Juglans californica(California black walnut (Jcal.S.LA.6 primary hap 2022))(info)GCA_023349395.1

•Juglans regia(English walnut)(info)GCF_001411555.2

•Juglans microcarpa x Juglans regia(J.microcarpa x regia eudicots (UCDavis 2019))(info)GCF_004785595.1

Carya

•Carya illinoinensis(pecan)(info)GCF_018687715.1

Fagaceae

Quercus

Quercus berberidifolia

•Quercus berberidifolia(California scrub oak (Qber.S.LA.60 alternate hap 2023))(info)GCA_028535905.1

•Quercus berberidifolia(California scrub oak (Qber.S.LA.60 primary hap 2023))(info)GCA_028535815.1

Quercus wislizeni

•Quercus wislizeni(interior live oak (QUWIS_CCGP_1 alternate hap 2022))(info)GCA_023055485.1

•Quercus wislizeni(interior live oak (QUWIS_CCGP_1 primary hap 2022))(info)GCA_023055345.1

Quercus tomentella

•Quercus tomentella(island oak (RSA801373 alternate hap 2023))(info)GCA_028535165.1

•Quercus tomentella(island oak (RSA801373 primary hap 2023))(info)GCA_028535515.1

Quercus suber

•Quercus suber(cork oak (v1 HL8 2018))(info)GCF_002906115.1

•Quercus suber(cork oak (v2 HL8 2018))(info)GCF_002906115.2

•Quercus suber(cork oak (v3 HL8 2024))(info)GCF_002906115.3

Quercus lobata

•Quercus lobata(valley oak (v3.0 2019))(info)GCF_001633185.1

•Quercus lobata(valley oak (v3.2 2019))(info)GCF_001633185.2

•Quercus robur(English oak (primary hap 2022))(info)GCF_932294415.1

Castanea

•Castanea sativa(European chestnut (Marrone di Chiusa Pesio 2024))(info)GCF_040712315.1

Betulaceae

Alnus

•Alnus glutinosa(eudicot A.glutinosa (primary hap 2023))(info)GCF_958979055.1

Corylus

•Corylus avellana(European hazelnut (Tombul 2020))(info)GCF_901000735.1

Heteromeles arbutifolia

•Heteromeles arbutifolia(toyon (HeAr 88 alternate hap 2022))(info)GCA_024363235.1

•Heteromeles arbutifolia(toyon (HeAr 88 primary hap 2022))(info)GCA_024362995.1

Malus

Malus domestica

•Malus domestica(apple (Golden Delicious X9273 #13 2017 genbank))(info)GCA_002114115.1

•Malus domestica(apple (Golden Delicious X9273 #13 2017 refseq))(info)GCF_002114115.1

•Malus sylvestris(European crab apple (2022))(info)GCF_916048215.2

Pyrus

Pyrus x bretschneideri

•Pyrus x bretschneideri(Chinese white pear (Dangshansuli 2012))(info)GCF_000315295.1

•Pyrus x bretschneideri(Chinese white pear (Hongxiangsu 2021))(info)GCF_019419815.1

•Pyrus communis(pear (primary hap 2023))(info)GCF_963583255.1

Amygdaleae

Prunus

•Prunus dulcis(almond)(info)GCF_902201215.1

•Prunus mume(Japanese apricot)(info)GCF_000346735.1

•Prunus persica(peach)(info)GCF_000346465.2

•Prunus avium(sweet cherry)(info)GCF_002207925.1

Rosoideae

Rosoideae incertae sedis

Rosa

Rosa chinensis

•Rosa chinensis(China rose (Old Blush v1 2018))(info)GCF_002994745.1

•Rosa chinensis(China rose (Old Blush v2 2019))(info)GCF_002994745.2

•Rosa x damascena(damask rose (2016))(info)GCA_001662545.1

•Rosa rugosa(eudicot R.rugosa (primary hap 2023))(info)GCF_958449725.1

Fragaria vesca subsp. vesca

•Fragaria vesca subsp. vesca(wild strawberry (2011 genbank))(info)GCA_000184155.1

•Fragaria vesca subsp. vesca(wild strawberry (2011 refseq))(info)GCF_000184155.1

•Fragaria x ananassa(strawberry (Reikou 2013))(info)GCA_000511835.1

Potentilleae incertae sedis

Argentina

•Argentina anserina(silverweed cinquefoil (primary hap 2022))(info)GCF_933775445.1

Cannabaceae

Cannabis

Cannabis sativa

•Cannabis sativa(Cannabis sativa ( 2020))(info)GCA_016165845.1

•Cannabis sativa(Cannabis sativa (Cannatonic 2016))(info)GCA_001865755.1

•Cannabis sativa(Cannabis sativa (Harvard OEB 2019))(info)GCF_900626175.2

•Cannabis sativa(Cannabis sativa (Jamaican Lion DASH 2019))(info)GCA_003660325.2

•Cannabis sativa(Cannabis sativa (Jamaican Lion Mother 2020))(info)GCA_012923435.1

•Cannabis sativa(Cannabis sativa (JL 2020))(info)GCA_013030365.1

•Cannabis sativa(eudicot C.sativa (Pink pepper KNU-18-1 2023))(info)GCF_029168945.1

Humulus

Humulus lupulus

•Humulus lupulus(European hop (primary hap 2023))(info)GCF_963169125.1

•Humulus lupulus var. lupulus(European hop (Shinshu Wase 2014))(info)GCA_000831365.1

Moraceae

Ficeae

Ficus

•Ficus carica(common fig (Dottato GU2019 2019))(info)GCA_009761775.1

Moreae

Morus

•Morus notabilis(mulberry M.notabilis)(info)GCF_000414095.1

•Ziziphus jujuba(common jujube (Dongzao 2015))(info)GCF_000826755.1

•Ziziphus jujuba(common jujube (Dongzao 2023))(info)GCF_031755915.1

•Ziziphus jujuba var. spinosa(common jujube (AT0 2021))(info)GCF_020796205.1

Fabales

Fabaceae

Papilionoideae

50 kb inversion clade

NPAAA clade

indigoferoid/millettioid clade

Phaseoleae

Vigna

Vigna unguiculata

•Vigna unguiculata(cowpea (IT97K-499-35 v1 2019))(info)GCF_004118075.1

•Vigna unguiculata(cowpea (IT97K-499-35 v2 2019))(info)GCF_004118075.2

Vigna radiata

Vigna radiata var. radiata

•Vigna radiata var. radiata(mung bean (VC1973A 2015 genbank))(info)GCA_000741045.2

•Vigna radiata var. radiata(mung bean (VC1973A 2015 refseq))(info)GCF_000741045.1

Vigna angularis

•Vigna angularis(adzuki bean (Jingnong 6 2015))(info)GCF_001190045.1

•Vigna angularis(adzuki bean (LongXiaoDou No.4 2021))(info)GCF_016808095.1

•Vigna umbellata(rice bean eudicots (VRB-3 Himshakti 2021))(info)GCF_018835915.1

Cajanus

Cajanus cajan

•Cajanus cajan(pigeon pea (v1 2016 BGI))(info)GCF_000340665.1

•Cajanus cajan(pigeon pea (v2 2016 BGI))(info)GCF_000340665.2

Glycine

Glycine subgen. Soja

Glycine max

•Glycine max(soybean (US DOE JGI-PGF v2.0 2010))(info)GCF_000004515.4

•Glycine max(soybean (US DOE JGI-PGF v2.1 2018))(info)GCF_000004515.5

•Glycine max(soybean (US DOE JGI-PGF v2 2021))(info)GCF_000004515.6

•Glycine max(soybean (Williams 82 2023))(info)GCA_030864155.1

•Glycine soja(wild soybean)(info)GCF_004193775.1

Phaseolus

Phaseolus vulgaris

•Phaseolus vulgaris(common bean)(info)GCF_000499845.1

•Phaseolus vulgaris(eudicot P.vulgaris (G19833 2024))(info)GCF_000499845.2

Abreae

Abrus

•Abrus precatorius(Indian licorice)(info)GCF_003935025.1

•Medicago truncatula(barrel medic (2018))(info)GCF_003473485.1

•Medicago truncatula(barrel medic (A17 2014))(info)GCF_000219495.3

•Medicago truncatula(barrel medic (HM340 2017))(info)GCA_002024945.1

Trifolium

•Trifolium pratense(red clover eudicots (HEN17-A07 2021))(info)GCF_020283565.1

Cicereae

Cicer

Cicer arietinum

•Cicer arietinum(chickpea)(info)GCF_000331145.1

•Cicer arietinum(chickpea (CDC Frontier Library 1 2024))(info)GCF_000331145.2

Fabeae

Lathyrus

•Lathyrus oleraceus(garden pea (Zhongwan6 2022))(info)GCF_024323335.1

Vicia

•Vicia villosa(hairy vetch (HV-30 2023))(info)GCF_029867415.1

robinioid clade

Loteae

Lotus

•Lotus japonicus(birdsfoot trefoil (B-129 2022))(info)GCF_012489685.1

mirbelioid clade

Mirbelieae

Gastrolobium

•Gastrolobium bilobum(eudicot G.bilobum (WA Gb01-03AN 2023))(info)GCF_033153095.1

dalbergioids sensu lato

•Arachis duranensis(wild peanut A.duranensis (v1 V14167 2017))(info)GCF_000817695.2

•Arachis duranensis(wild peanut A.duranensis (v2 V14167 2020))(info)GCF_000817695.3

Arachis hypogaea

•Arachis hypogaea(peanut)(info)GCF_003086295.2

•Arachis hypogaea(peanut (GDAAS-fuhuasheng2018 2019))(info)GCA_004170445.1

•Arachis hypogaea(peanut (Tifrunner 2023))(info)GCF_003086295.3

•Arachis ipaensis(wild peanut A.ipaensis (K30076 2017))(info)GCF_000816755.2

•Arachis stenosperma(wild peanut A.stenosperma (V10309 2020))(info)GCF_014773155.1

Dalbergia clade

Aeschynomene

•Aeschynomene evenia(shrubby jointvetch A. evenia (CIAT22838 2020))(info)GCA_013621005.1

genistoids sensu lato

core genistoids

Genisteae

Lupinus

•Lupinus angustifolius(narrow-leaved blue lupine)(info)GCF_001865875.1

•Lupinus albus(white lupine (Amiga GWH2020 2020))(info)GCA_010261695.1

•Neltuma alba(algarrobo blanco (v1 B1F8T4 2019))(info)GCF_004799145.1

•Neltuma alba(algarrobo blanco (v2 B1F8T4 2019))(info)GCF_004799145.2

Prosopis

•Prosopis cineraria(ghaf (Desert tree PC_DT_omini 2023))(info)GCF_029017545.1

Cucurbita pepo subsp. pepo

•Cucurbita pepo subsp. pepo(vegetable marrow (v1 mu-cu-16 2017))(info)GCF_002806865.1

•Cucurbita pepo subsp. pepo(vegetable marrow (v2 mu-cu-16 2017))(info)GCF_002806865.2

•Cucurbita moschata(crookneck pumpkin)(info)GCF_002738365.1

•Cucurbita maxima(winter squash)(info)GCF_002738345.1

Momordiceae

Momordica

•Momordica charantia(bitter melon)(info)GCF_001995035.1

Benincaseae

Cucumis

•Cucumis sativus(cucumber)(info)GCF_000004075.3

Cucumis melo

•Cucumis melo(muskmelon (AY 2022))(info)GCF_025177605.1

•Cucumis melo(muskmelon (DHL92 2012))(info)GCF_000313045.1

Citrullus

•Citrullus lanatus(watermelon (97103 2019))(info)GCA_000238415.2

Benincasa

•Benincasa hispida(wax gourd)(info)GCF_009727055.1

Celastrales

Celastraceae

Tripterygium

•Tripterygium wilfordii(thunder duke vine)(info)GCF_013401445.1

•Raphanus sativus(radish (v1 WS10039 2015))(info)GCF_000801105.1

•Raphanus sativus(radish (v2 WK10039 2023))(info)GCF_000801105.2

Brassica

•Brassica rapa(field mustard (Chiifu-401-42 2020))(info)GCF_000309985.2

Brassica napus

•Brassica napus(rape (Da-Ae 2021))(info)GCF_020379485.1

•Brassica napus(rape (ZS11 2017))(info)GCF_000686985.2

Brassica oleracea

•Brassica oleracea(wild cabbage (2018))(info)GCA_900416815.2

•Brassica oleracea var. oleracea(wild cabbage)(info)GCF_000695525.1

Brassica juncea

•Brassica juncea var. tumida(zha cai (T84-66 inbred line 2016))(info)GCA_001687265.1

Camelineae

Arabidopsis

Arabidopsis thaliana

•Arabidopsis thaliana(thale cress (tair10 Columbia 2011))(info)GCF_000001735.3

•Arabidopsis thaliana(thale cress (tair10.1 Columbia 2018))(info)GCF_000001735.4

Arabidopsis lyrata

•Arabidopsis lyrata subsp. lyrata(lyrate rockcress)(info)GCF_000004255.2

Camelina

•Camelina sativa(false flax)(info)GCF_000633955.1

Capsella

•Capsella rubella(pink shepherd's-purse)(info)GCF_000375325.1

Thlaspideae

Thlaspi

•Thlaspi arvense(field pennycress (KM-2021 2021))(info)GCA_018983045.1

Eutremeae

Eutrema

•Eutrema salsugineum(saltwater cress)(info)GCF_000478725.1

Cardamineae

Barbarea

•Barbarea vulgaris(winter cress (G-type 2016))(info)GCA_001920985.1

Caricaceae

Carica

•Carica papaya(papaya)(info)GCF_000150535.2

Cleomaceae

New World clade

Tarenaya

•Tarenaya hassleriana(spider flower)(info)GCF_000463585.1

•Syzygium oleosum(blue lilly pilly tree (NSW1041296 2022))(info)GCF_021117445.2

•Syzygium oleosum(scented satinash)(info)GCF_900635055.1

Eucalypteae

Eucalyptus

Eucalyptus grandis

•Eucalyptus grandis(rose gum (2021))(info)GCF_016545825.1

•Eucalyptus grandis(rose gum (BRASUZ1 2014))(info)GCF_000612305.1

•Rhodamnia argentea(silver malletwood (14919 2019))(info)GCF_900635035.1

•Rhodamnia argentea(silver malletwood (NSW1041297 2021))(info)GCF_020921035.1

Lythraceae

Punica

•Punica granatum(pomegranate)(info)GCF_007655135.1

Trapa

•Trapa natans(water chestnut (Nanhuling F231 2024))(info)GCA_035582545.1

•Theobroma cacao(cacao)(info)GCF_000208745.1

Herrania

•Herrania umbratica(wild Colombian cocoa)(info)GCF_002168275.1

Malvoideae

Gossypium

Gossypium hirsutum

•Gossypium hirsutum(cotton G.hirsutum (BGI 2015))(info)GCF_000987745.1

•Gossypium hirsutum(cotton G.hirsutum (HudsonAlpha 2021))(info)GCF_007990345.1

Gossypium raimondii

•Gossypium raimondii(cotton G.raimondii)(info)GCF_000327365.1

•Gossypium raimondii(Peruvian cotton (G.raimondii 2012 DOE))(info)GCF_000327365.2

•Gossypium raimondii(Peruvian cotton (GPD5lz 2022))(info)GCF_025698545.1

Gossypium arboreum

•Gossypium arboreum(tree cotton (Shixiya-1 2022))(info)GCF_025698485.1

•Gossypium arboreum(tree cotton (Shixiya1 2015 BGI))(info)GCF_000612285.1

Abelmoschus

•Abelmoschus esculentus(emerald green okra A.esculentus (Green Star 2024))(info)GCA_035048815.1

Hibiscus

•Hibiscus syriacus(rose of Sharon)(info)GCF_006381635.1

Helicteroideae

Durio

•Durio zibethinus(durian)(info)GCF_002303985.1

•Citrus x clementina(clementine)(info)GCF_000493195.1

•Citrus x limon(lemon (UCLL1 2023))(info)GCA_034663555.1

Citrus sinensis

•Citrus sinensis(sweet orange)(info)GCF_000317415.1

•Citrus sinensis(Valencia sweet orange 2022)(info)GCF_022201045.2

Anacardiaceae

Mangifera

•Mangifera indica(mango)(info)GCF_011075055.1

Pistacia

•Pistacia vera(pistachio)(info)GCF_008641045.1

rosids incertae sedis

•Vitis riparia x Vitis rupestris(eudicot V.riparia x Vitis rupestris (2022))(info)GCA_946000675.1

•Vitis riparia(riverbank grape)(info)GCF_004353265.1

Vitis vinifera

•Vitis vinifera(wine grape (Chardonnay FPS 04 2020))(info)GCA_011037095.1

•Vitis vinifera(wine grape (Chkhaveri 2017))(info)GCA_002922885.1

•Vitis vinifera(wine grape (Pinot Noir 40024 2023))(info)GCF_030704535.1

•Vitis vinifera(wine grape (PN40024 2009))(info)GCF_000003745.3