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141 accessions

Taxonomy:

root › cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Laurasiatheria › Chiroptera

Taxonomy information:

View on NCBI (taxonomy ID: 9397)

•Myotis myotis(greater mouse-eared bat (2020 Bat1K))(info)GCF_014108235.1

•Myotis myotis(greater mouse-eared bat (2019 Broad))(info)GCA_004026985.1

Myotis yumanensis

•Myotis yumanensis(Yuma myotis (MYYU_CA2020_CCGP alternate hap 2023))(info)GCA_028536395.1

•Myotis yumanensis(Yuma myotis (MYYU_CA2020_CCGP primary hap 2023 genbank))(info)GCA_028538775.1

•Myotis yumanensis(Yuma myotis (MYYU_CA2020_CCGP primary hap 2023 refseq))(info)GCF_028538775.1

Myotis daubentonii

•Myotis daubentonii(Daubenton's bat (alternate hap 2023))(info)GCA_963242275.1

•Myotis daubentonii(Daubenton's bat (primary hap 2023 refseq))(info)GCF_963259705.1

•Myotis daubentonii(Daubenton's bat (primary hap 2023 genbank))(info)GCA_963259705.1

Myotis mystacinus

•Myotis mystacinus(whiskered bat (hap1 2024))(info)GCA_964094495.2

•Myotis mystacinus(whiskered bat (hap2 2024))(info)GCA_964195625.1

Myotis nattereri

•Myotis nattereri(Natterer's bat (hap2.1 2024))(info)GCA_964212025.1

•Myotis nattereri(Natterer's bat (hap2.2 2025))(info)GCA_964212025.2

•Myotis nattereri(Natterer's bat (hap1.1 2024))(info)GCA_964212035.1

•Myotis nattereri(Natterer's bat (hap1.2 2025))(info)GCA_964212035.2

Myotis emarginatus

•Myotis emarginatus(Geoffroy's bat (hap1.1 2025))(info)GCA_965115925.1

•Myotis emarginatus(Geoffroy's bat (hap2.1 2025))(info)GCA_965115945.1

•Myotis brandtii(Brandt's bat)(info)GCF_000412655.1

•Myotis davidii(David's myotis bat)(info)GCF_000327345.1

•Myotis lucifugus(little brown bat)(info)GCF_000147115.1

•Myotis pilosus(Rickett's big-footed myotis (AB-2021 2024))(info)GCA_036010255.1

Corynorhinus

Corynorhinus townsendii

•Corynorhinus townsendii(Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022))(info)GCA_026230055.1

•Corynorhinus townsendii(Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022))(info)GCA_026230045.1

Antrozous

•Antrozous pallidus(pallid bat (TK200870 primary hap 2023))(info)GCA_027563665.1

Pipistrellus

Pipistrellus pipistrellus

•Pipistrellus pipistrellus(common pipistrelle (alternate hap 2020))(info)GCA_903992515.1

•Pipistrellus pipistrellus(common pipistrelle (2020))(info)GCA_903992545.1

•Pipistrellus pipistrellus(common pipistrelle (hap1.1 2025))(info)GCA_965203405.1

•Pipistrellus pipistrellus(common pipistrelle (hap2.1 2025))(info)GCA_965204225.1

•Pipistrellus pipistrellus(common pipistrelle (Broad 2019))(info)GCA_004026625.1

Pipistrellus pygmaeus

•Pipistrellus pygmaeus(soprano pipistrelle (primary hap 2023))(info)GCA_949987585.1

•Pipistrellus pygmaeus(soprano pipistrelle (alternate hap 2023))(info)GCA_949987765.1

Pipistrellus nathusii

•Pipistrellus nathusii(Nathusius's pipistrelle (primary hap 2024))(info)GCA_963693515.1

•Pipistrellus nathusii(Nathusius's pipistrelle (hap2.1 2025))(info)GCA_964656075.1

•Pipistrellus nathusii(Nathusius's pipistrelle (hap1.1 2025))(info)GCA_964656225.1

•Pipistrellus hanaki(Hanaki's dwarf bat (2024))(info)GCA_964339955.1

•Pipistrellus kuhlii(Kuhl's pipistrelle (2020))(info)GCF_014108245.1

Cnephaeus

Cnephaeus nilssonii

•Cnephaeus nilssonii(northern bat (primary hap 2023))(info)GCA_951640355.1

•Cnephaeus nilssonii(northern bat (alternate hap 2023))(info)GCA_951640545.1

Plecotus

•Plecotus auritus(brown big-eared bat (primary hap 2023))(info)GCA_963455305.1

Vespertilio

•Vespertilio murinus(particolored bat (primary hap 2024))(info)GCA_963924515.1

Nyctalus

Nyctalus leisleri

•Nyctalus leisleri(lesser noctule (v1 hap1 2024))(info)GCA_964264875.1

•Nyctalus leisleri(lesser noctule (v2 hap1 2025))(info)GCA_964264875.2

•Nyctalus leisleri(lesser noctule (v1 hap2 2024))(info)GCA_964264895.1

•Nyctalus leisleri(lesser noctule (v2 hap2 2025))(info)GCA_964264895.2

Eptesicus

Eptesicus fuscus

•Eptesicus fuscus(big brown bat (TK198812 2023))(info)GCF_027574615.1

•Eptesicus fuscus(big brown bat (BU_THK_EF1 2012))(info)GCF_000308155.1

Murina

•Murina feae(little tube-nosed bat)(info)GCA_004026665.1

Lasiurus

•Lasiurus borealis(red bat)(info)GCA_004026805.1

Phyllostomidae

Phyllostominae

Phyllostomus

Phyllostomus discolor

•Phyllostomus discolor(pale spear-nosed bat (alternate hap MPI-MPIP 2019))(info)GCA_004115245.1

•Phyllostomus discolor(pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 alternate hap 2020))(info)GCA_004115245.2

•Phyllostomus discolor(pale spear-nosed bat (MPI-MPIP v1 2019))(info)GCF_004126475.1

•Phyllostomus discolor(pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 primary hap 2020))(info)GCF_004126475.2

•Phyllostomus hastatus(greater spear-nosed bat (2021 Texas Tech U))(info)GCF_019186645.2

Micronycteris

•Micronycteris hirsuta(hairy big-eared bat (US037 2019 Broad))(info)GCA_004026765.1

Tonatia

•Tonatia bakeri(stripe-headed round-eared bat)(info)GCA_004024845.1

Desmodontinae

Desmodus

Desmodus rotundus

•Desmodus rotundus(common vampire bat (v1 HL8 alternate hap 2022 genbank))(info)GCA_022682395.1

•Desmodus rotundus(common vampire bat (v2 HL8 alternate hap 2022 genbank))(info)GCA_022682395.2

•Desmodus rotundus(common vampire bat (v1 HL8 primary hap 2022 genbank))(info)GCA_022682495.1

•Desmodus rotundus(common vampire bat (v2 HL8 primary hap 2022 genbank))(info)GCA_022682495.2

•Desmodus rotundus(common vampire bat (v1 HL8 primary hap 2022 refseq))(info)GCF_022682495.1

•Desmodus rotundus(common vampire bat (v2 DRU21DN04 2018 genbank))(info)GCA_002940915.2

•Desmodus rotundus(common vampire bat (v2 DRU21DN04 2018 refseq))(info)GCF_002940915.1

•Desmodus rotundus(common vampire bat (v2 HL8 primary hap 2022 refseq))(info)GCF_022682495.2

•Desmodus rotundus(common vampire bat (v3 DRU21DN04 2018))(info)GCF_002940915.2

Stenodermatinae

Artibeus

Artibeus lituratus

•Artibeus lituratus(great fruit-eating bat (v1 hap1 2024))(info)GCA_038363095.1

•Artibeus lituratus(great fruit-eating bat (v2 hap1 2024))(info)GCA_038363095.2

•Artibeus lituratus(great fruit-eating bat (mArtLit1hap2 2024))(info)GCA_038363175.2

Artibeus intermedius

•Artibeus intermedius(great fruit-eating bat (hap1 2024))(info)GCA_038363145.1

•Artibeus intermedius(bat A.intermedius (hap2 2024))(info)GCA_038363225.1

Artibeus jamaicensis

•Artibeus jamaicensis(Jamaican fruit-eating bat (US092 2019 Broad))(info)GCA_004027435.1

•Artibeus jamaicensis(Jamaican fruit-eating bat (1a 2020 Wuhan U))(info)GCF_014825515.1

•Artibeus jamaicensis(Jamaican fruit-eating bat (2021))(info)GCF_021234435.1

Sturnira

Sturnira hondurensis

•Sturnira hondurensis(Honduran yellow-shouldered bat (v2.0 Veracruz 20B 2020))(info)GCF_014824575.1

•Sturnira hondurensis(Honduran yellow-shouldered bat (v2.1 Veracruz 20B 2020))(info)GCF_014824575.3

•Sturnira hondurensis(neotropical fruit bat)(info)GCF_014824575.2

Glossophaginae

Glossophaga

Glossophaga mutica

•Glossophaga mutica(Merriam's long-tongued bat (hap1 2024))(info)GCA_039655065.1

•Glossophaga mutica(Merriam's long-tongued bat (hap2 2024))(info)GCA_039656995.1

Anoura

•Anoura caudifer(tailed tailless bat)(info)GCA_004027475.1

Carolliinae

Carollia

•Carollia perspicillata(Seba's short-tailed bat)(info)GCA_004027735.1

Molossidae

Molossus

Molossus nigricans

•Molossus nigricans(northern black mastiff bat (mMolNig1 2022))(info)GCA_026936385.1

•Molossus nigricans(northern black mastiff bat (mMolNig1hap2 2024))(info)GCA_039880925.1

•Molossus nigricans(northern black mastiff bat (mMolNig1hap1 2024))(info)GCA_039880945.1

Molossus alvarezi

•Molossus alvarezi(Alvarez's mastiff bat (A012 2023))(info)GCA_031001765.1

•Molossus alvarezi(Alvarez's mastiff bat (hap1 2024))(info)GCA_037157525.1

•Molossus alvarezi(Alvarez's mastiff bat (hap2 2024))(info)GCA_037176705.1

•Molossus molossus(Pallas's mastiff bat)(info)GCF_014108415.1

Tadarida

Tadarida brasiliensis

•Tadarida brasiliensis(Brazilian free-tailed bat (primary hap 2023))(info)GCA_030848825.1

•Tadarida brasiliensis(Brazilian free-tailed bat (US034 2019))(info)GCA_004025005.1

Mops

•Mops condylurus(Angolan free-tailed bat (Cote d'Ivoire 20210831_DDa 2024))(info)GCA_043748645.1

Emballonuridae

Emballonurinae

Saccopteryx

Saccopteryx bilineata

•Saccopteryx bilineata(greater sac-winged bat (primary hap 2024 genbank))(info)GCA_036850765.1

•Saccopteryx bilineata(greater sac-winged bat (primary hap 2024 refseq))(info)GCF_036850765.1

Saccopteryx leptura

•Saccopteryx leptura(lesser sac-winged bat (primary hap 2024 genbank))(info)GCA_036850995.1

•Saccopteryx leptura(lesser sac-winged bat (primary hap 2024 refseq))(info)GCF_036850995.1

Rhynchonycteris

Rhynchonycteris naso

•Rhynchonycteris naso(proboscis bat (hap1 2024))(info)GCA_037038545.1

•Rhynchonycteris naso(proboscis bat (hap2 2024))(info)GCA_037038555.1

Miniopteridae

Miniopterus

Miniopterus schreibersii

•Miniopterus schreibersii(Schreibers' long-fingered bat (v1 hap2 2024))(info)GCA_964145185.1

•Miniopterus schreibersii(Schreibers' long-fingered bat (v2 hap2 2025))(info)GCA_964145185.2

•Miniopterus schreibersii(Schreibers' long-fingered bat (v1 hap1 2024))(info)GCA_964146895.1

•Miniopterus schreibersii(Schreibers' long-fingered bat (v2 hap1 2025))(info)GCA_964146895.2

•Miniopterus schreibersii(Schreibers' long-fingered bat (US075 2019))(info)GCA_004026525.1

•Miniopterus natalensis(Natal long-fingered bat)(info)GCF_001595765.1

Mormoopidae

Mormoops

•Mormoops blainvillei(Antillean ghost-faced bat)(info)GCA_004026545.1

Pteronotus

•Pteronotus parnellii(Parnell's mustached bat (2013))(info)GCA_000465405.1

•Pteronotus mesoamericanus(Parnell's mustached bat (Mesoamerican 2021))(info)GCF_021234165.1

Noctilionidae

Noctilio

•Noctilio leporinus(greater bulldog bat)(info)GCA_004026585.1

Rhinolophus ferrumequinum

•Rhinolophus ferrumequinum(greater horseshoe bat (v1 MPI-CBG 2019 genbank))(info)GCA_004115265.2

•Rhinolophus ferrumequinum(greater horseshoe bat (MPI-CBG alternate hap 2019))(info)GCA_004115295.1

•Rhinolophus ferrumequinum(greater horseshoe bat (mRhiFer1 2020))(info)GCA_014108255.1

•Rhinolophus ferrumequinum(greater horseshoe bat (v1 MPI-CBG 2019 refseq))(info)GCF_004115265.1

•Rhinolophus ferrumequinum(greater horseshoe bat (v2 MPI-CBG 2019))(info)GCF_004115265.2

•Rhinolophus affinis(intermediate horseshoe bat (China 20211001_DDa primary hap 2024))(info)GCA_043728065.1

•Rhinolophus trifoliatus(trefoil horseshoe bat (Malaysia primary hap 2024))(info)GCA_043728145.1

Rhinolophus perniger

•Rhinolophus perniger lanosus(northern woolly horseshoe bat (20210929_DDc primary hap 2024))(info)GCA_043748575.1

•Rhinolophus yonghoiseni(Yong Hoi Sen's woolly horseshoe bat (Malaysia 20210929_DDd primary hap 2024))(info)GCA_043880425.1

Rhinolophus hipposideros

•Rhinolophus hipposideros(lesser horseshoe bat (hap1 2024))(info)GCA_964194185.1

•Rhinolophus hipposideros(lesser horseshoe bat (hap2 2024))(info)GCA_964194215.1

Rhinolophus sinicus

•Rhinolophus sinicus(Chinese rufous horseshoe bat)(info)GCA_001888835.1

•Rhinolophus sinicus(Chinese rufous horseshoe bat (RSC01 2024))(info)GCA_036562045.1

•Rhinolophus sinicus(Chinese rufous horseshoe bat (RSC01 2024))(info)GCF_036562045.2

Hipposideridae

Hipposideros

Hipposideros larvatus sensu lato

Hipposideros larvatus

•Hipposideros larvatus(intermediate roundleaf bat (primary hap 2023))(info)GCA_031876335.1

•Hipposideros larvatus(bat H.larvatus (China 20210929_DDb primary hap 2024))(info)GCA_043727955.1

Hipposideros armiger

•Hipposideros armiger(great roundleaf bat (v1 ML-2016 2016 genbank))(info)GCA_001890085.1

•Hipposideros armiger(great roundleaf bat (v1 ML-2016 2016 refseq))(info)GCF_001890085.1

•Hipposideros armiger(great roundleaf bat (v2 ML-2016 2016))(info)GCF_001890085.2

•Hipposideros galeritus(Cantor's roundleaf bat)(info)GCA_004027415.1

Aselliscus

•Aselliscus stoliczkanus(Stoliczka's trident bat (China 2021113_DDA primary hap 2024))(info)GCA_043727835.1

Doryrhina

•Doryrhina cyclops(cyclops roundleaf bat (Cote d'Ivoire 20210929_DDa primary hap 2024))(info)GCA_043880285.1

Rhinopomatidae

Rhinopoma

•Rhinopoma microphyllum(greater mouse-tailed bat (20210906_DDa primary hap 2024))(info)GCA_043880545.1

Megadermatidae

Megaderma

•Megaderma spasma(lesser false vampire bat (Vietnam 20211001_DDb primary hap 2024))(info)GCA_043880595.1

Lyroderma

•Lyroderma lyra(Indian false vampire)(info)GCA_004026885.1

Craseonycteridae

Craseonycteris

•Craseonycteris thonglongyai(hog-nosed bat)(info)GCA_004027555.1

Rousettus aegyptiacus

•Rousettus aegyptiacus(Egyptian rousette (v1 2020 refseq))(info)GCF_014176215.1

•Rousettus aegyptiacus(Egyptian rousette (US006 2019 Broad))(info)GCA_004024865.1

•Rousettus aegyptiacus(Egyptian rousette (v1 2020 genbank))(info)GCA_014176215.1

•Rousettus aegyptiacus(Egyptian rousette (1219 2016 Boston U))(info)GCF_001466805.2

•Rousettus leschenaultii(Leschenault's rousette (2020))(info)GCA_015472975.1

Pteropodinae

Pteropus

•Pteropus alecto(black flying fox)(info)GCF_000325575.1

Pteropus vampyrus

•Pteropus vampyrus(Indian flying fox)(info)GCF_902729225.1

•Pteropus vampyrus(large flying fox)(info)GCF_000151845.1

Eidolon

•Eidolon helvum(straw-colored fruit bat)(info)GCA_000465285.1

Cynopterinae

Cynopterus

•Cynopterus sphinx(Indian short-nosed fruit bat (CYSPWHU 2023))(info)GCA_030015415.1

Macroglossinae

Macroglossus

•Macroglossus sobrinus(long-tongued fruit bat (US102 2019 Broad))(info)GCA_004027375.1