JBrowse 2 genome browser hubs

100 accessions

Taxonomy:

root › cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Laurasiatheria › Artiodactyla › Whippomorpha

Taxonomy information:

View on NCBI (taxonomy ID: 2653789)

•Monodon monoceros(narwhal (Baffin Bay Population NGI 2022))(info)GCA_005190385.3

•Monodon monoceros(narwhal (BS41 2019 Broad))(info)GCA_004026685.1

•Monodon monoceros(narwhal (Baffin Bay 2019))(info)GCF_005190385.1

Delphinapterus

Delphinapterus leucas

•Delphinapterus leucas(beluga whale (GAN/ISIS: 26980492/103006 v2 2017))(info)GCA_002288925.2

•Delphinapterus leucas(beluga whale (Cook Inlet, Alaska, USA DL-CIB17-05 2020))(info)GCA_009917745.1

•Delphinapterus leucas(beluga whale (GAN/ISIS: 26980492/103006 v3 2019))(info)GCF_002288925.2

Phocoenidae

Phocoena

Phocoena sinus

•Phocoena sinus(vaquita (alternate hap mPhoSin1 2019))(info)GCA_008692045.1

•Phocoena sinus(vaquita (mPhoSin1 2019))(info)GCF_008692025.1

Phocoena phocoena

•Phocoena phocoena(harbor porpoise (primary hap 2024 genbank))(info)GCA_963924675.1

•Phocoena phocoena(harbor porpoise (primary hap 2024 refseq))(info)GCF_963924675.1

•Phocoena phocoena(harbor porpoise (BS71 2019))(info)GCA_004363495.1

Neophocaena

Neophocaena asiaeorientalis

Neophocaena asiaeorientalis asiaeorientalis

•Neophocaena asiaeorientalis asiaeorientalis(Yangtze finless porpoise (v1 2018 refseq))(info)GCF_003031525.1

•Neophocaena asiaeorientalis asiaeorientalis(Yangtze finless porpoise (v1 wild 2018 genbank))(info)GCA_003031525.1

•Neophocaena asiaeorientalis asiaeorientalis(Yangtze finless porpoise (v2 wild 2018 refseq))(info)GCF_003031525.2

Delphinidae

Tursiops

Tursiops truncatus

•Tursiops truncatus(common bottlenose dolphin (paternal 2020))(info)GCA_011762515.1

•Tursiops truncatus(common bottlenose dolphin (maternal 2020))(info)GCA_011762535.1

•Tursiops truncatus(common bottlenose dolphin (maternal Y genbank 2020))(info)GCA_011762595.1

•Tursiops truncatus(common bottlenose dolphin (maternal Y refseq 2020))(info)GCF_011762595.1

•Tursiops truncatus(common bottlenose dolphin (MMES2002162SC 2016 genbank))(info)GCA_001922835.1

•Tursiops truncatus(common bottlenose dolphin (MMES2002162SC 2016 refseq))(info)GCF_001922835.1

•Tursiops truncatus(common bottlenose dolphin (mTurTru1 2024))(info)GCF_011762595.2

Pseudorca

Pseudorca crassidens

•Pseudorca crassidens(false killer whale (hap1 2024 genbank))(info)GCA_039906515.1

•Pseudorca crassidens(false killer whale (hap2 2024))(info)GCA_039906525.1

•Pseudorca crassidens(false killer whale (hap1 2024 refseq))(info)GCF_039906515.1

Orcinus

Orcinus orca

•Orcinus orca(killer whale (alternate hap 2022))(info)GCA_937001455.1

•Orcinus orca(killer whale (2022))(info)GCF_937001465.1

•Orcinus orca(killer whale (Morgan 2013))(info)GCF_000331955.2

Lagenorhynchus

Lagenorhynchus albirostris

•Lagenorhynchus albirostris(white-beaked dolphin (alternate hap 2023))(info)GCA_949774935.1

•Lagenorhynchus albirostris(white-beaked dolphin (primary hap 2023 genbank))(info)GCA_949774975.1

•Lagenorhynchus albirostris(white-beaked dolphin (primary hap 2023 refseq))(info)GCF_949774975.1

Delphinus

Delphinus delphis

•Delphinus delphis(saddleback dolphin (v1 primary hap 2023 genbank))(info)GCA_949987515.1

•Delphinus delphis(saddleback dolphin (alternate hap 2023))(info)GCA_949987525.1

•Delphinus delphis(saddleback dolphin (v1 primary hap 2023 refseq))(info)GCF_949987515.1

•Delphinus delphis(saddleback dolphin (v2 primary hap 2024 refseq))(info)GCF_949987515.2

Stenella

Stenella coeruleoalba

•Stenella coeruleoalba(striped dolphin (primary hap 2023))(info)GCA_951394435.1

•Stenella coeruleoalba(striped dolphin (alternate hap 2023))(info)GCA_951394445.1

Globicephala

Globicephala melas

•Globicephala melas(long-finned pilot whale (v2 primary hap 2024 genbank))(info)GCA_963455315.2

•Globicephala melas(long-finned pilot whale (v1 primary hap 2023))(info)GCF_963455315.1

•Globicephala melas(long-finned pilot whale (v2 primary hap 2024 refseq))(info)GCF_963455315.2

•Globicephala melas(long-finned pilot whale (X-22926-18 2019))(info)GCF_006547405.1

Leucopleurus

Leucopleurus acutus

•Leucopleurus acutus(Atlantic white-sided dolphin (mLagAcu1.hap1.1 2024))(info)GCA_964270905.1

•Leucopleurus acutus(Atlantic white-sided dolphin (mLagAcu1.hap2.1 2024))(info)GCA_964270935.1

Grampus

Grampus griseus

•Grampus griseus(Risso's dolphin (hap1.1 2024))(info)GCA_964374135.1

•Grampus griseus(Risso's dolphin (hap2.1 2024))(info)GCA_964374185.1

Sagmatias

•Sagmatias obliquidens(Pacific white-sided dolphin)(info)GCF_003676395.1

Ziphiidae

Mesoplodon

Mesoplodon densirostris

•Mesoplodon densirostris(Blainville's beaked whale (alternate hap 2022))(info)GCA_025094165.1

•Mesoplodon densirostris(Blainville's beaked whale (primary hap 2022 genbank))(info)GCA_025265405.1

•Mesoplodon densirostris(Blainville's beaked whale (primary hap 2022 refseq))(info)GCF_025265405.1

Mesoplodon bidens

•Mesoplodon bidens(Sowerby's beaked whale (hap2 2024))(info)GCA_964148845.1

•Mesoplodon bidens(Sowerby's beaked whale (hap1 2024))(info)GCA_964165515.1

•Mesoplodon bidens(Sowerby's beaked whale (US080 2019))(info)GCA_004027085.1

Mesoplodon mirus

•Mesoplodon mirus(True's beaked whale (hap1.1 2024))(info)GCA_964341445.1

•Mesoplodon mirus(True's beaked whale (hap2.1 2024))(info)GCA_964341485.1

Hyperoodon

Hyperoodon ampullatus

•Hyperoodon ampullatus(northern bottlenose whale (primary hap 2023))(info)GCA_949752795.1

•Hyperoodon ampullatus(northern bottlenose whale (alternate hap 2023))(info)GCA_949752845.1

Ziphius

•Ziphius cavirostris(Cuvier's beaked whale)(info)GCA_004364475.1

Physeteridae

Kogia

Kogia breviceps

•Kogia breviceps(pygmy sperm whale (mKogBre1 haplotype 1 2022 genbank))(info)GCA_026419965.1

•Kogia breviceps(pygmy sperm whale (mKogBre1 haplotype 2 2022))(info)GCA_026419985.1

•Kogia breviceps(pygmy sperm whale (haplotype 1 2022 refseq))(info)GCF_026419965.1

•Kogia breviceps(pygmy sperm whale)(info)GCA_004363705.1

Physeter

Physeter macrocephalus

•Physeter macrocephalus(sperm whale (SW-GA 2019))(info)GCF_002837175.2

•Physeter macrocephalus(sperm whale (SW-GA 2023))(info)GCF_002837175.3

Iniidae

Inia

Inia geoffrensis

•Inia geoffrensis(boutu (hap1 2024))(info)GCA_036417435.1

•Inia geoffrensis(boutu (hap2 2024))(info)GCA_036417475.1

•Inia geoffrensis(boutu (BS63 2019))(info)GCA_004363515.1

Lipotidae

Lipotes

Lipotes vexillifer

•Lipotes vexillifer(Yangtze River dolphin (v1 BGI 2013 genbank))(info)GCA_000442215.1

•Lipotes vexillifer(Yangtze River dolphin (v1 BGI 2013 refseq))(info)GCF_000442215.1

•Lipotes vexillifer(Yangtze River dolphin (v1.1 BGI 2013 refseq))(info)GCF_000442215.2

Platanistidae

Platanista

•Platanista minor(Indus River dolphin)(info)GCA_004363435.1

Mysticeti

Balaenopteridae

Balaenoptera

Balaenoptera musculus

•Balaenoptera musculus(blue whale (alternate hap JJ_BM4_2016_0621 2019))(info)GCA_008658375.1

•Balaenoptera musculus(Blue whale (JJ_BM4_2016_0621 v2 alternate hap 2020))(info)GCA_008658375.2

•Balaenoptera musculus(blue whale (JJ_BM4_2016_0621 v2 2020))(info)GCA_009873245.2

•Balaenoptera musculus(blue whale (JJ_BM4_2016_0621 v3 primary hap 2020))(info)GCF_009873245.2

Balaenoptera ricei

•Balaenoptera ricei(Rice's whale (hap1 2023))(info)GCA_028017805.1

•Balaenoptera ricei(Rice's whale (hap2 2023 genbank))(info)GCA_028023285.1

•Balaenoptera ricei(Rice's whale (hap2 2023 refseq))(info)GCF_028023285.1

Balaenoptera acutorostrata

•Balaenoptera acutorostrata(minke whale (alternate hap 2023))(info)GCA_950005055.1

•Balaenoptera acutorostrata(minke whale (primary hap 2023 refseq))(info)GCF_949987535.1

•Balaenoptera acutorostrata(minke whale (primary hap 2023 genbank))(info)GCA_949987535.1

Balaenoptera acutorostrata scammoni

•Balaenoptera acutorostrata scammoni(minke whale (2013 genbank))(info)GCA_000493695.1

•Balaenoptera acutorostrata scammoni(minke whale (2013 refseq))(info)GCF_000493695.1

Balaenoptera borealis

•Balaenoptera borealis(sei whale (hap2.1 2025))(info)GCA_965194725.1

•Balaenoptera borealis(sei whale (hap1.1 2025))(info)GCA_965194805.1

Balaenoptera physalus

•Balaenoptera physalus(fin whale (hap2.1 2025))(info)GCA_965194765.1

•Balaenoptera physalus(fin whale (hap1.1 2025))(info)GCA_965194825.1

•Balaenoptera bonaerensis(Antarctic minke whale)(info)GCA_000978805.1

Megaptera

•Megaptera novaeangliae(humpback whale (KW2013002 2024))(info)GCA_041834305.1

Eschrichtiidae

Eschrichtius

Eschrichtius robustus

•Eschrichtius robustus(grey whale (primary hap 2023 genbank))(info)GCA_028021215.1

•Eschrichtius robustus(grey whale (mEscRob2 alternate hap 2023))(info)GCA_028021475.1

•Eschrichtius robustus(grey whale (primary hap 2023 refseq))(info)GCF_028021215.1

•Eschrichtius robustus(grey whale)(info)GCA_004363415.1

Balaenidae

Eubalaena

Eubalaena glacialis

•Eubalaena glacialis(North Atlantic right whale (hap2 2023 genbank))(info)GCA_028564815.1

•Eubalaena glacialis(North Atlantic right whale (hap1 2023))(info)GCA_028571275.1

•Eubalaena glacialis(North Atlantic right whale (hap2 + XY 2023 refseq))(info)GCF_028564815.1

•Eubalaena japonica(North Pacific right whale)(info)GCA_004363455.1

Ancodonta

Hippopotamidae

Hippopotamus

Hippopotamus amphibius

•Hippopotamus amphibius(hippopotamus (BS01 2019 Broad))(info)GCA_004027065.1

•Hippopotamus amphibius(hippopotamus (HIP001 2018))(info)GCA_002995585.1

Hippopotamus amphibius kiboko

•Hippopotamus amphibius kiboko(hippopotamus (mHipAmp2 hap1 2023))(info)GCA_030028035.1

•Hippopotamus amphibius kiboko(hippopotamus (v2 hap2 2023 refseq))(info)GCF_030028045.1

•Hippopotamus amphibius kiboko(hippopotamus (v2 hap2 2023 genbank))(info)GCA_030028045.1