GenArk taxonomy - Invertebrate

View list of species as table for Invertebrate

1471 accessions

root

cellular organisms

•Acanthamoeba astronyxis(A.astronyxis (2015))(info)GCA_000826245.1

Acanthamoeba castellanii

•Acanthamoeba castellanii(A.castellanii (2015))(info)GCA_000826485.1

•Acanthamoeba castellanii(A.castellanii (C3 2021))(info)GCA_021020595.1

•Acanthamoeba castellanii(A.castellanii (Neff 2011))(info)GCA_000193105.1

•Acanthamoeba castellanii(A.castellanii (Neff 2021))(info)GCA_021020605.1

Acanthamoeba castellanii str. Neff

•Acanthamoeba castellanii str. Neff(A.castellanii str. (Neff 2013 genbank))(info)GCA_000313135.1

•Acanthamoeba castellanii str. Neff(A.castellanii str. (Neff 2013 refseq))(info)GCF_000313135.1

•Acanthamoeba comandoni(A.comandoni (Pb30/40 2025))(info)GCA_002025285.2

•Acanthamoeba culbertsoni(A.culbertsoni (2015))(info)GCA_000826265.1

•Acanthamoeba divionensis(A.divionensis (2015))(info)GCA_000826405.1

•Acanthamoeba healyi(A.healyi (2015))(info)GCA_000826305.1

Acanthamoeba lenticulata

•Acanthamoeba lenticulata(A.lenticulata (2015))(info)GCA_000826285.1

•Acanthamoeba lenticulata(A.lenticulata (72/2 2025))(info)GCA_002105255.2

•Acanthamoeba lugdunensis(A.lugdunensis (2015))(info)GCA_000826425.1

•Acanthamoeba mauritaniensis(A.mauritaniensis (2015))(info)GCA_000826465.1

•Acanthamoeba palestinensis(A.palestinensis (2015))(info)GCA_000826325.1

•Acanthamoeba pearcei(A.pearcei (2015))(info)GCA_000826505.1

•Acanthamoeba polyphaga(A.polyphaga (2015))(info)GCA_000826345.1

•Acanthamoeba quina(A.quina (2015))(info)GCA_000826445.1

•Acanthamoeba rhysodes(A.rhysodes (2015))(info)GCA_000826385.1

•Acanthamoeba royreba(A.royreba (2015))(info)GCA_000826365.1

unclassified Acanthamoeba

•Acanthamoeba sp. SK_2022a(A.sp. (SK_2022a 2023))(info)GCA_027943295.1

•Acanthamoeba sp. SK_2022b(A.sp. (SK_2022b 2023))(info)GCA_027943245.1

•Acanthamoeba sp. SK_2022c(A.sp. (SK_2022c 2023))(info)GCA_027944975.1

Balamuthiidae

Balamuthia

Balamuthia mandrillaris

•Balamuthia mandrillaris(B.mandrillaris (2046 2015))(info)GCA_001262475.1

•Balamuthia mandrillaris(B.mandrillaris (CDC-V039 2015))(info)GCA_001185145.1

•Paramoeba pemaquidensis(P.pemaquidensis (CCAP 1560/4 2017))(info)GCA_002151225.1

Acytostelium subglobosum

•Acytostelium subglobosum LB1(cellular slime mold A.subglobosum (LB1 2014))(info)GCF_000787575.1

Heterostelium

•Heterostelium pallidum(cellular slime mold H.album (PN500 2010))(info)GCF_000004825.1

Cavenderiaceae

Cavenderia

•Cavenderia fasciculata(cellular slime mold C.fasciculata (SH3 2011))(info)GCF_000203815.1

Dictyosteliales

Dictyosteliaceae

Dictyostelium

Dictyostelium discoideum

Dictyostelium discoideum AX4

•Dictyostelium discoideum AX4(cellular slime mold D.discoideum (AX4 2009))(info)GCF_000004695.1

•Dictyostelium discoideum AX4(cellular slime molds (AX4 2009))(info)GCA_000004695.1

Dictyostelium purpureum

•Dictyostelium purpureum(cellular slime mold D.purpureum (QSDP1 2011))(info)GCF_000190715.1

•Dictyostelium purpureum(cellular slime molds (QSDP1 2011))(info)GCA_000190715.1

•Entamoeba dispar SAW760(E.dispar (SAW760 2008))(info)GCF_000209125.1

Entamoeba histolytica

•Entamoeba histolytica DS4-868(E.histolytica (DS4-868 2021))(info)GCA_018466815.1

Entamoeba histolytica HM-1 [0.0000]

•Entamoeba histolytica HM-1[0.0000]

Entamoeba histolytica HM-1 [0.0000]

•Entamoeba histolytica HM-1[0.0000]

Entamoeba histolytica HM-1 [0.0000]

•Entamoeba histolytica HM-1[0.0000]

Entamoeba histolytica HM-3 [0.0000]

•Entamoeba histolytica HM-3[0.0000]

•Entamoeba histolytica KU27(E.histolytica (KU27 2013))(info)GCA_000338855.1

•Entamoeba histolytica KU48(E.histolytica (KU48 2021))(info)GCA_019059535.1

•Entamoeba histolytica KU50(E.histolytica (KU50 2021))(info)GCA_020283535.1

Entamoeba invadens

•Entamoeba invadens IP1(E.invadens (IP1 2013))(info)GCF_000330505.1

•Entamoeba moshkovskii(E.moshkovskii (Laredo 2018))(info)GCA_002914575.1

Entamoeba nuttalli

Entamoeba nuttalli P19

•Entamoeba nuttalli P19(E.nuttalli (P19 2012 genbank))(info)GCA_000257125.1

•Entamoeba nuttalli P19(E.nuttalli (P19 2012 refseq))(info)GCF_000257125.1

Mastigamoebidae

Mastigamoeba

•Mastigamoeba balamuthi(M.balamuthi (2019))(info)GCA_902651635.1

unclassified Saccoglossus

Saccoglossus sp. HW-2024a

•Saccoglossus sp. HW-2024a(acorn worm (v2 HW-2024a hap1 2025))(info)GCA_040954625.2

•Saccoglossus sp. HW-2024a(acorn worm (v2 HW-2024a hap2 2025))(info)GCA_040954595.2

•Saccoglossus kowalevskii(hemichordates S.kowalevskii)(info)GCF_000003605.2

Ptychoderidae

Ptychodera

•Ptychodera flava(hemichordates P.flava (L36383 2024))(info)GCF_041260155.1

Branchiostoma lanceolatum

•Branchiostoma lanceolatum(amphioxus (2018))(info)GCA_900088365.1

•Branchiostoma lanceolatum(European lancelet (hap1 2024))(info)GCA_035149815.1

•Branchiostoma lanceolatum(European lancelet (hap1.1 2024))(info)GCA_964187965.1

•Branchiostoma lanceolatum(European lancelet (hap2 2024 refseq))(info)GCF_035083965.1

•Branchiostoma floridae x Branchiostoma belcheri(Belcher's lancelet (bbbf 2021))(info)GCA_019207075.1

•Branchiostoma belcheri(Belcher's lancelet (outbred BF01 2016))(info)GCF_001625305.1

•Branchiostoma floridae x Branchiostoma japonicum(Florida amphioxus (bjbf hap2 2020))(info)GCA_015852565.1

•Branchiostoma floridae(Florida lancelet (S238N-H82 2020))(info)GCF_000003815.2

Asymmetron

•Asymmetron lucayanum(lancelets A.lucayanum (AD20110701 2016))(info)GCA_001663935.1

Clavelina lepadiformis

•Clavelina lepadiformis(light-bulb sea squirt (primary hap 2022 genbank))(info)GCA_947623445.1

•Clavelina lepadiformis(light-bulb sea squirt (primary hap 2022 refseq))(info)GCF_947623445.1

Polyclinidae

Aplidium

•Aplidium turbinatum(tunicate A.turbinatum (primary hap 2021))(info)GCA_918807975.1

Didemnidae

Trididemnum

•Trididemnum clinides(tunicate T.clinides (primary hap 2023))(info)GCA_963675345.1

•Corella eumyota(orange-tipped seq squirt (alternate hap 2023))(info)GCA_963082865.1

•Corella eumyota(orange-tipped seq squirt (primary hap 2023))(info)GCA_963082875.1

Ascidiidae

Ascidia

•Ascidia mentula(pink sea squirt (2022))(info)GCA_947561715.1

Ascidiella

•Ascidiella aspersa(tunicate A.aspersa (primary hap 2024))(info)GCA_963924565.1

Phallusia

•Phallusia mammillata(warty sea squirt (Sete-AP-2010 2018))(info)GCA_003260075.1

Cionidae

Ciona

•Ciona intestinalis(vase tunicate C.intestinalis (2013))(info)GCF_000224145.3

•Styela clava(stalked seq squirt)(info)GCF_013122585.1

•Styela clava(tunicate S.clava (kaStyClav1.hap1.1 2024))(info)GCA_964204865.1

•Styela clava(tunicate S.clava (kaStyClav1.hap2.1 2024))(info)GCA_964204955.1

Botryllus

•Botryllus schlosseri(tunicate B.schlosseri (356a 2013))(info)GCA_000444245.1

Pyuridae

Halocynthia

•Halocynthia aurantium(tunicate H.aurantium (Mutsu-Bay-2010 2020))(info)GCA_013436065.1

•Halocynthia roretzi(tunicate H.roretzi (Mutsu-Bay-2010 2020))(info)GCA_013436055.1

•Bathochordaeus stygius(tunicate B.stygius (SS-2019 2019))(info)GCA_004367955.1

Mesochordaeus

•Mesochordaeus erythrocephalus(tunicate M.erythrocephalus (Monterey-2011 2019))(info)GCA_004367975.1

Oikopleura

•Oikopleura albicans(tunicate O.albicans (PointB-2012 2019))(info)GCA_004367875.1

•Oikopleura dioica(tunicate O.dioica (2010))(info)GCA_000209555.1

•Oikopleura longicauda(tunicate O.longicauda (LaJolla-2011 2019))(info)GCA_004367895.1

•Oikopleura vanhoeffeni(tunicate O.vanhoeffeni (WitlessB-2012 2019))(info)GCA_004367855.1

Fritillariidae

Fritillaria

•Fritillaria borealis(tunicate F.borealis (Espegrend-2014 2019))(info)GCA_004368075.1

•Thalia democratica(tunicate T.democratica (hap1.1 2025))(info)GCA_965202585.1

•Thalia democratica(tunicate T.democratica (hap2.1 2025))(info)GCA_965202575.1

•Patiria miniata(bat star)(info)GCF_015706575.1

Acanthasteridae

Acanthaster

•Acanthaster planci(crown-of-thorns starfish)(info)GCF_001949145.1

•Asterias rubens(European starfish (2020))(info)GCF_902459465.1

•Asterias rubens(European starfish (alternate hap 2019))(info)GCA_902459445.1

•Asterias amurensis(starfish (2023))(info)GCF_032118995.1

Pisaster

Pisaster brevispinus

•Pisaster brevispinus(starfish (M0D059179O alternate hap 2022))(info)GCA_023634265.1

•Pisaster brevispinus(starfish (M0D059179O primary hap 2022))(info)GCA_023634235.1

•Amphiura filiformis(brittle stars A.filiformis (2024))(info)GCF_039555335.1

•Lytechinus variegatus(green sea urchin)(info)GCF_018143015.1

Lytechinus pictus

•Lytechinus pictus(painted urchin (DCL-2020 2023))(info)GCF_015342785.2

•Lytechinus pictus(painted urchin (F3 Inbred 2024))(info)GCF_037042905.1

•Strongylocentrotus purpuratus(purple sea urchin)(info)GCF_000002235.5

Echinometridae

Heliocidaris

•Heliocidaris tuberculata(red sea urchin (PLD820 2022))(info)GCA_025618425.1

•Heliocidaris erythrogramma(shortspined sea urchin (PLD85 2022))(info)GCA_025617745.1

•Diadema antillarum(sea urchins D.antillarum (AM-2024a 2024))(info)GCF_040938485.1

•Diadema setosum(sea urchins D.setosum (2024))(info)GCF_964275005.1

•Apostichopus japonicus(Japanese sea cucumber (1M-3 2024))(info)GCF_037975245.1

•Apostichopus parvimensis(sea cucumbers A.parvimensis (Sea Cucumber 01 2015))(info)GCA_000934455.1

•Anneissia japonica(crinoids A.japonica)(info)GCF_011630105.1

Antedonidae

Antedon

•Antedon mediterranea(crinoids A.mediterranea (2024))(info)GCF_964355755.1

•Lysandra bellargus(Adonis blue)(info)GCA_905333045.1

Aricia

•Aricia agestis(brown argus butterfly (refseq 2021))(info)GCF_905147365.1

Cyaniris

•Cyaniris semiargus(butterfly C.semiargus)(info)GCA_905187585.1

Plebejus

•Plebejus argus(butterfly P.argus)(info)GCA_905404155.1

Glaucopsyche

•Glaucopsyche alexis(green-underside blue)(info)GCA_905404095.1

Celastrina

•Celastrina argiolus(holly blue)(info)GCA_905187575.1

Lycaeninae

Lycaena

•Lycaena phlaeas(common copper)(info)GCA_905333005.1

Helleia

•Helleia helle(violet copper butterfly (2023))(info)GCA_963853865.1

•Papilio xuthus(Asian swallowtail (v2 2015))(info)GCF_000836235.2

•Papilio polytes(common Mormon)(info)GCF_000836215.1

Papilio machaon

•Papilio machaon(common yellow swallowtail (Sanger 2021))(info)GCF_912999745.1

•Papilio machaon(common yellow swallowtail (ya'a_city_454_Pm BGI 2015))(info)GCF_001298355.1

Troidini

Battus

•Battus philenor(pipe-vine swallowtail (CCGP_79_NKW_IND1hap1 2023))(info)GCF_028537555.1

•Nymphalis polychloros(blackleg tortoiseshell)(info)GCA_905220585.1

Aglais

•Nymphalis io(European peacock (2021 refseq))(info)GCF_905147045.1

•Nymphalis urticae(small tortoiseshell)(info)GCA_905147175.1

Vanessa

Vanessa tameamea

•Vanessa tameamea(butterfly V.tameamea)(info)GCF_002938995.1

•Vanessa tameamea(fly V.tameamea (UH-Manoa-2023 primary hap 2024))(info)GCF_037043105.1

•Vanessa cardui(painted lady (refseq 2021))(info)GCF_905220365.1

•Vanessa atalanta(red admiral (refseq 2021))(info)GCF_905147765.1

•Melitaea athalia(butterfly M.athalia)(info)GCA_905220545.1

•Melitaea cinxia(Glanville fritillary (refseq 2021))(info)GCF_905220565.1

•Coenonympha glycerion(butterfly C.glycerion (2023))(info)GCA_963855885.1

Maniolina

Maniola

jurtina species complex

•Maniola jurtina(meadow brown (refseq 2021))(info)GCF_905333055.1

Aphantopus

Maniola hyperantus

•Maniola hyperantus(ringlet)(info)GCF_902806685.1

•Maniola hyperantus(ringlet (primary hap 2024))(info)GCF_902806685.2

Parargina

Pararge

•Pararge aegeria(speckled wood butterfly (refseq 2021))(info)GCF_905163445.1

Mycalesina

Bicyclus

Bicyclus anynana

•Bicyclus anynana(squinting bush brown)(info)GCF_900239965.1

•Bicyclus anynana(squinting bush brown (primary hap 2022))(info)GCF_947172395.1

Heliconiinae

Heliconiini

Eueides

•Eueides isabella(butterfly E.isabella)(info)GCA_019049475.1

Dryas

Dryas iulia

•Dryas iulia moderata(julia butterfly)(info)GCA_019049465.1

Heliconius

Heliconius melpomene

•Heliconius melpomene aglaope(postman butterfly (2015))(info)GCA_001485885.1

•Heliconius sara(Sara longwing butterfly (2021))(info)GCA_917862395.1

Argynnini

Fabriciana

•Fabriciana adippe(high brown fritillary)(info)GCA_905404265.1

Boloria

Clossiana

•Boloria selene(silver meadow fritillary)(info)GCA_905231865.2

Limenitidinae

Limenitidini

Limenitis

•Limenitis camilla(butterfly L.camilla)(info)GCA_905147385.1

•Danaus plexippus(monarch butterfly (2021))(info)GCF_018135715.1

•Danaus plexippus plexippus(monarch butterfly)(info)GCF_009731565.1

Pieridae

Dismorphiinae

Leptidea

•Leptidea sinapis(butterfly L.sinapis (2021 refseq))(info)GCF_905404315.1

Pierinae

Pierini

Pieris

•Pieris napi(butterfly P.napi (v1.2 refseq 2022))(info)GCF_905475465.1

Pieris rapae

•Pieris rapae(cabbage white)(info)GCF_001856805.1

•Pieris rapae(cabbage white (refseq 2021))(info)GCF_905147795.1

•Pieris brassicae(large cabbage white (refseq 2021))(info)GCF_905147105.1

Anthocharis

•Anthocharis cardamines(orange tip (primary hap 2021))(info)GCA_905404175.1

Coliadinae

Colias

•Colias croceus(clouded yellow (refseq 2021))(info)GCF_905220415.1

Zerene

•Zerene cesonia(dogface butterfly)(info)GCF_012273895.1

•Ostrinia furnacalis(Asian corn borer (v3 ACB-3 2019))(info)GCF_004193835.3

•Ostrinia nubilalis(European corn borer (primary hap 2023))(info)GCF_963855985.1

Marasmia

•Marasmia exigua(moth C.exigua)(info)GCA_019059595.1

Crambinae

Chrysoteuchia

•Chrysoteuchia culmella(moth C.culmella)(info)GCA_910589605.1

Nymphulinae

Parapoynx

•Parapoynx stratiotata(moth P.stratiotata)(info)GCA_910589355.1

•Galleria mellonella(greater wax moth (Carbio01_MB 2019 refseq))(info)GCF_003640425.2

•Galleria mellonella(greater wax moth (WM207_F2 2022))(info)GCF_026898425.1

Achroia

•Achroia grisella(lesser wax moth (CSIRO2021 2023))(info)GCF_030625045.1

Corcyra

•Corcyra cephalonica(rice moth (NJ 2024))(info)GCA_040436485.1

Phycitinae

Plodia

•Plodia interpunctella(Indianmeal moth (v2 USDA-ARS_2022_Savannah primary hap 2024))(info)GCF_027563975.2

Amyelois

Amyelois transitella

•Amyelois transitella(moth A.transitella)(info)GCF_001186105.1

•Amyelois transitella(moth A.transitella (CPQ primary hap 2023))(info)GCF_032362555.1

Pyralinae

Endotricha

•Endotricha flammealis(moth E.flammealis)(info)GCA_905163395.1

•Spodoptera exigua(beet armyworm)(info)GCA_011316535.1

Spodoptera frugiperda

•Spodoptera frugiperda(fall armyworm (Faw-zju v1.1 refseq 2020))(info)GCF_011064685.2

•Spodoptera frugiperda(fall armyworm (SF20-4 2022))(info)GCF_023101765.2

•Spodoptera litura(moth S.litura (Ishihara v3 2017))(info)GCF_002706865.2

Amphipyra

•Amphipyra berbera(moth A.berbera)(info)GCA_910594945.1

•Amphipyra tragopoginis(moth A.tragopoginis)(info)GCA_905220435.1

Plusiinae

Trichoplusia

•Trichoplusia ni(cabbage looper)(info)GCF_003590095.1

Autographa

•Autographa pulchrina(moth A.pulchrina)(info)GCA_905475315.1

•Autographa gamma(silver Y moth)(info)GCA_905146925.1

Abrostola

•Abrostola tripartita(moth A.tripartita)(info)GCA_905340225.1

Noctuinae

Hadenini

Mamestra

•Mamestra brassicae(cabbage moth)(info)GCA_905163435.1

Hecatera

•Hecatera dysodea(moth H.dysodea)(info)GCA_905332915.1

Mythimna

•Mythimna ferrago(moth M.ferrago)(info)GCA_910589285.1

•Mythimna impura(moth M.impura)(info)GCA_905147345.1

Phlogophora

•Phlogophora meticulosa(moth P.meticulosa)(info)GCA_905147745.1

Noctuini

Noctua

•Noctua pronuba(large yellow underwing)(info)GCA_905220335.1

•Noctua fimbriata(moth N.fimbriata)(info)GCA_905163415.1

•Noctua janthe(moth N.janthe)(info)GCA_910589295.1

Ochropleura

•Ochropleura plecta(moth O.plecta)(info)GCA_905475445.1

Xestia

•Xestia xanthographa(moth X.xanthographa)(info)GCA_905147715.2

Heliothinae

Helicoverpa

•Helicoverpa zea(corn earworm (HzStark_Cry1AcR 2022))(info)GCF_022581195.2

Helicoverpa armigera

•Helicoverpa armigera(cotton bollworm (CAAS_96S 2023))(info)GCF_030705265.1

•Helicoverpa armigera(cotton bollworm (Harm_GR_Male_#8 2017 refseq))(info)GCF_002156985.1

•Helicoverpa armigera(cotton bollworm (SCD 2022))(info)GCF_023701775.1

Ipimorphinae

Cosmia

•Cosmia trapezina(dun-bar pinion)(info)GCA_905163495.1

Acronictinae

Acronicta

•Acronicta aceris(moth A.aceris)(info)GCA_910591435.1

Craniophora

•Craniophora ligustri(moth C.ligustri)(info)GCA_905163465.1

Xyleninae

Atethmia

•Atethmia centrago(moth A.centrago)(info)GCA_905333075.2

Erebidae

Lymantriinae

Lymantria

•Lymantria monacha(black-arched tussock moth)(info)GCA_905163515.1

Euproctis

•Euproctis similis(moth E.similis)(info)GCA_905147225.1

Hypeninae

Hypena

•Hypena proboscidalis(moth H.proboscidalis)(info)GCA_905147285.1

Schrankia

•Schrankia costaestrigalis(pinion-streaked snout moth)(info)GCA_905475405.1

Boletobiinae

Laspeyria

•Laspeyria flexula(moth L.flexula)(info)GCA_905147015.1

Arctiinae

Spilosomini

Spilosoma

•Spilosoma lubricipeda(moth S.lubricipeda)(info)GCA_905220595.1

Erebinae

Anticarsia

•Anticarsia gemmatalis(velvetbean caterpillar (Stoneville strain Benzon Research Colony primary hap 2025))(info)GCF_050436995.1

Notodontidae

Pygaerinae

Clostera

•Clostera curtula(moth C.curtula)(info)GCA_905475355.1

Notodontinae

Notodonta

•Notodonta dromedarius(moth N.dromedarius)(info)GCA_905147325.1

Pheosia

•Pheosia tremula(moth P.tremula)(info)GCA_905333125.1

Phalerinae

Phalera

•Phalera bucephala(moth P.bucephala)(info)GCA_905147815.2

•Hesperia comma(common branded skipper)(info)GCA_905404135.1

Eudaminae

Eudamini

Epargyreus

•Epargyreus clarus(moth E.clarus (2025))(info)GCF_041222505.1

Pyrginae

Erynnis

•Erynnis tages(moth E.tages)(info)GCA_905147235.1

•Bombyx mori(domestic silkworm (p50T 2023))(info)GCF_030269925.1

•Bombyx mori(domestic silkworm (refseq 2020))(info)GCF_014905235.1

•Bombyx mandarina(wild silkworm)(info)GCF_003987935.1

•Samia ricini(Indian eri silkmoth (White GU1 2025))(info)GCA_048571015.1

Lasiocampidae

Lasiocampinae

Dendrolimus

•Dendrolimus punctatus(masson pine moth)(info)GCA_012273795.1

•Deilephila porcellus(moth D.porcellus)(info)GCA_905220455.1

Dilophonotini

Hemaris

•Hemaris fuciformis(moth H.fuciformis)(info)GCA_907164795.1

Smerinthinae

Smerinthini

Laothoe

•Laothoe populi(moth L.populi)(info)GCA_905220505.1

Mimas

•Mimas tiliae(moth M.tiliae)(info)GCA_905332985.1

Sphinginae

Sphingini

Manduca

•Manduca sexta(tobacco hornworm)(info)GCF_014839805.1

•Ennomos fuscantarius(dusky thorn)(info)GCA_905220475.1

•Ennomos quercinarius(moth E.quercinarius)(info)GCA_910589525.1

Crocallis

•Crocallis elinguaria(moth C.elinguaria)(info)GCA_907269065.1

Ectropis

•Ectropis grisescens(moth E.grisescens)(info)GCA_017562165.1

Hylaea

•Hylaea fasciaria(moth H.fasciaria)(info)GCA_905147375.1

Erannis

•Erannis defoliaria(mottled umber moth)(info)GCA_905404285.1

Biston

•Biston betularia(pepper-and-salt moth)(info)GCA_905404145.1

Sterrhinae

Idaea

•Idaea aversata(Riband wave)(info)GCA_907269075.1

•Habrosyne pyritoides(moth H.pyritoides)(info)GCA_907165245.1

Thyatira

•Thyatira batis(moth T.batis)(info)GCA_905147785.1

•Cydia pomonella(codling moth (Jiuquan 2019))(info)GCA_003425675.2

•Cydia pomonella(codling moth (Wapato2018A 2023))(info)GCF_033807575.1

•Cydia amplana(moth C.amplana (primary hap 2023))(info)GCF_948474715.1

•Cydia fagiglandana(moth C.fagiglandana (primary hap 2023))(info)GCF_963556715.1

•Cydia splendana(moth C.splendana (2022 refseq))(info)GCF_910591565.1

•Cydia strobilella(moth C.strobilella (primary hap 2022))(info)GCF_947568885.1

Leguminivora

•Leguminivora glycinivorella(moths (SPB_JAAS2020 2022))(info)GCF_023078275.1

Grapholita

•Grapholita molesta(oriental fruit moth (lab01 2022))(info)GCA_022674325.1

Olethreutini

Apotomis

•Apotomis turbidana(moth A.turbidana)(info)GCA_905147355.1

Hedya

•Hedya salicella(moth H.salicella)(info)GCA_905404275.1

Eucosmini

Notocelia

•Notocelia uddmanniana(moth N.uddmanniana)(info)GCA_905163555.1

Tortricinae

Archipini

Choristoneura

•Choristoneura fumiferana(eastern spruce budworm (2022))(info)GCF_025370935.1

Copromorphoidea

Carposinidae

Carposina

•Carposina sasakii(moth C.sasakii)(info)GCA_014607495.2

•Zygaena filipendulae(moth Z.filipendulae)(info)GCA_907165275.1

•Zeuzera pyrina(moth Z.pyrina)(info)GCA_907165235.1

•Bembecia ichneumoniformis(six-belted clearwing)(info)GCA_910589475.1

•Plutella xylostella(diamondback moth (LV U. Adelaide 2021))(info)GCA_019096205.1

•Plutella xylostella(diamondback moth (U. Liverpool 2020))(info)GCF_905116875.1

•Plutella xylostella(diamondback moth (Wellcome Sanger 2022))(info)GCF_932276165.1

Ypsolophidae

Ypsolopha

•Ypsolopha scabrella(moth Y.scabrella)(info)GCA_910592155.1

Gelechioidea

Blastobasidae

Blastobasis

•Blastobasis adustella(moth B.adustella)(info)GCA_907269095.1

•Blastobasis lacticolella(moth B.lacticolella)(info)GCA_905147135.1

Depressariidae

Depressariidae incertae sedis

Carcina

•Carcina quercana(moth C.quercana)(info)GCA_910589575.1

Cosmopterigidae

Cosmopteriginae

Hyposmocoma

•Hyposmocoma kahamanoa(moth H.kahamanoa)(info)GCF_003589595.1

Gelechiidae

Apatetrinae

Pectinophora

•Pectinophora gossypiella(pink bollworm (primary hap 2022))(info)GCF_024362695.1

•Tinea semifulvella(moth T.semifulvella)(info)GCA_910589645.1

•Tinea trinotella(moth T.trinotella)(info)GCA_905220615.1

•Anopheles funestus(African malaria mosquito (FUMOZ 2018))(info)GCA_003951495.1

•Anopheles funestus(African malaria mosquito (primary hap DQ-416_04 2022))(info)GCF_943734845.2

culicifacies species complex

•Anopheles culicifacies(mosquito A.culicifacies (species A-37_1 2013))(info)GCA_000473375.1

•Anopheles marshallii(mosquito A.marshallii (primary hap 2022))(info)GCF_943734725.1

minimus group

minimus species complex

•Anopheles minimus(mosquito A.minimus (MINIMUS1 2013))(info)GCA_000349025.1

•Anopheles moucheti(mosquito A.moucheti (primary hap 2022))(info)GCF_943734755.1

Pyretophorus

gambiae species complex

Anopheles gambiae

•Anopheles gambiae(African malaria mosquito (primary hap NW_F1_1 2022))(info)GCF_943734735.2

•Anopheles gambiae(African malaria mosquito (S 2008))(info)GCA_000150785.1

•Anopheles gambiae str. PEST(African malaria mosquito (PEST 2006))(info)GCF_000005575.2

Anopheles arabiensis

•Anopheles arabiensis(mosquito A.arabiensis (DONG5_A 2013))(info)GCA_000349185.1

•Anopheles arabiensis(mosquito A.arabiensis (DONGOLA 2021))(info)GCF_016920715.1

Anopheles coluzzii

•Anopheles coluzzii(mosquito A.coluzzi (MOPTI 2021))(info)GCF_016920705.1

•Anopheles coluzzii(mosquito A.coluzzii (M 2008))(info)GCA_000150765.1

•Anopheles coluzzii(mosquito A.coluzzii (Ngousso colony 2019))(info)GCA_004136515.2

•Anopheles coluzzii(mosquito A.coluzzii (primary hap 2022))(info)GCF_943734685.1

•Anopheles melas(mosquito A.melas (CM1001059_A 2014))(info)GCA_000473525.2

Anopheles merus

•Anopheles merus(mosquito A.merus (MAF 2014))(info)GCA_000473845.2

•Anopheles merus(mosquito A.merus (MAF 2021))(info)GCF_017562075.2

•Anopheles quadriannulatus(mosquito A.quadriannulatus (QUAD4_A 2013))(info)GCA_000349065.1

•Anopheles christyi(mosquito A.christyi (ACHKN1017 2013))(info)GCA_000349165.1

sundaicus species complex

•Anopheles epiroticus(mosquito A.epiroticus (epiroticus2 2013))(info)GCA_000349105.1

Neocellia

Anopheles stephensi

•Anopheles stephensi(Asian malaria mosquito)(info)GCF_013141755.1

•Anopheles stephensi(Asian malaria mosquito (Indian Wild Type Walter Reed 2013))(info)GCA_000300775.2

•Anopheles stephensi(Asian malaria mosquito (SDA-500 2013))(info)GCA_000349045.1

Anopheles maculatus group

•Anopheles maculatus(mosquito A.maculatus (maculatus3 2013))(info)GCA_000473185.1

•Anopheles maculipalpis(mosquito A.maculipalpis (primary hap 2022))(info)GCF_943734695.1

Neomyzomyia

leucosphyrus group

leucosphyrus subgroup

dirus species complex

•Anopheles dirus(mosquito A.dirus (WRAIR2 2013))(info)GCA_000349145.1

punctulatus species complex

•Anopheles farauti(mosquito A.farauti (FAR1 2014))(info)GCA_000473445.2

ardensis group

nili species complex

•Anopheles nili(mosquito A.nili (primary hap 2022))(info)GCF_943737925.1

•Anopheles darlingi(American malaria mosquito (2013))(info)GCA_000211455.3

•Anopheles darlingi(American malaria mosquito (primary hap 2022))(info)GCF_943734745.1

albimanus section

albimanus series

Anopheles albimanus

•Anopheles albimanus(mosquito A.albimanus (ALBI9_A 2017))(info)GCA_000349125.2

•Anopheles albimanus(mosquito A.albimanus (STELCA 2020))(info)GCF_013758885.1

oswaldoi series

oswaldoi group

oswaldoi subgroup

•Anopheles aquasalis(mosquito A.aquasalis (primary hap 2022))(info)GCF_943734665.1

maculipennis species complex

•Anopheles atroparvus(mosquito A.atroparvus (EBRO 2013))(info)GCA_000473505.1

Laticorn

Myzorhynchus

coustani group

•Anopheles coustani(mosquito A.coustani (2023))(info)GCF_943734705.1

•Anopheles ziemanni(mosquito A.ziemanni (2023))(info)GCF_943734765.1

hyrcanus group

Anopheles sinensis

•Anopheles sinensis(mosquito A.sinensis (2014))(info)GCA_000441895.2

•Anopheles sinensis(mosquito A.sinensis (SINENSIS 2014))(info)GCA_000472065.2

Kerteszia

•Anopheles bellator(mosquito A.bellator (2023))(info)GCF_943735745.2

•Anopheles cruzii(mosquito A.cruzii (2022))(info)GCF_943734635.1

•Aedes albopictus(Asian tiger mosquito (AalbF3 FPA 2021))(info)GCA_018104305.1

•Aedes albopictus(Asian tiger mosquito (Aalbo alternate FPA 2019))(info)GCA_006516635.1

•Aedes albopictus(Asian tiger mosquito (C6/36 2017 refseq))(info)GCF_001876365.2

•Aedes albopictus(Asian tiger mosquito (Foshan 2024))(info)GCF_035046485.1

•Aedes albopictus(Asian tiger mosquito (Foshan BGI 2016))(info)GCA_001444175.2

•Aedes albopictus(Asian tiger mosquito (v2 FPA 2019))(info)GCF_006496715.2

Aedes aegypti

•Aedes aegypti(yellow fever mosquito (Aag2 2022))(info)GCA_021653915.1

•Aedes aegypti(yellow fever mosquito (LVP_AGWG 2017 refseq))(info)GCF_002204515.2

Armigeres

•Armigeres subalbatus(mosquito A.subalbatus (Guangzhou_Male 2023))(info)GCF_024139115.2

Ochlerotatus

•Ochlerotatus camptorhynchus(mosquito O.camptorhynchus (MF236.1 2024))(info)GCF_037179485.1

Sabethini

Malaya

•Malaya genurostris(mosquito M.genurostris (Urasoe2022 2023))(info)GCF_030247185.1

Sabethes

•Sabethes cyaneus(mosquito S.cyaneus (primary hap 2022))(info)GCF_943734655.1

Topomyia

•Topomyia yanbarensis(mosquito T.yanbarensis (Yona2022 2023))(info)GCF_030247195.1

Wyeomyia

•Wyeomyia smithii(pitcher-plant mosquito (HCP4-BCI-WySm-NY-G18 2023))(info)GCF_029784165.1

Uranotaeniini

Uranotaenia

•Uranotaenia lowii(mosquito U.lowii(MFRU-FL 2023))(info)GCF_029784155.1

Culicini

Culex

Culex pipiens complex

Culex pipiens

•Culex pipiens pallens(northern house mosquito (v2 TS 2022))(info)GCF_016801865.2

Culex quinquefasciatus

•Culex quinquefasciatus(southern house mosquito)(info)GCF_015732765.1

•Culex quinquefasciatus(southern house mosquito (JHB 2007 refseq))(info)GCF_000209185.1

Toxorhynchitinae

Toxorhynchites

Toxorhynchites rutilus

•Toxorhynchites rutilus septentrionalis(mosquito T.rutilus septentrionalis (SRP 2023))(info)GCF_029784135.1

•Culicoides brevitarsis(fly C.brevitarsis (CSIRO-B50_1 2024))(info)GCF_036172545.1

Monoculicoides

•Culicoides sonorensis(fly C.sonorensis (2021))(info)GCA_900258525.3

•Chironomus tepperi(fly C.tepperi (1889 2024))(info)GCF_022539635.2

•Bradysia coprophila(fly B.coprophila (v1 Holo2 2020 refseq))(info)GCF_014529535.1

•Bradysia coprophila(fly B.coprophila (v2 Holo2 2023 genbank))(info)GCA_014529535.2

•Sitodiplosis mosellana(orange wheat blossom midge (CC-2019 2019))(info)GCF_009176505.1

Contarinia

•Contarinia nasturtii(swede midge)(info)GCF_009176525.2

Lutzomyia longipalpis

•Lutzomyia longipalpis(fly L.longipalpis (2012))(info)GCA_000265325.1

•Lutzomyia longipalpis(fly L.longipalpis (SR_M1_2022 2022))(info)GCF_024334085.1

Phlebotomus

Euphlebotomus

•Phlebotomus argentipes(fly P.argentipes (2022))(info)GCF_947086385.1

Phlebotomus

Phlebotomus papatasi

•Phlebotomus papatasi(fly P.papatasi (2012))(info)GCA_000262795.1

•Phlebotomus papatasi(fly P.papatasi (M1 2022))(info)GCF_024763615.1

•Rhagoletis pomonella(apple maggot)(info)GCF_013731165.1

•Rhagoletis zephyria(snowberry fruit fly (East Lansing v1.1 2016))(info)GCF_001687245.2

Toxotrypanini

Anastrepha

•Anastrepha obliqua(fly A.obliqua (idAnaObli1 2023))(info)GCF_027943255.1

•Anastrepha ludens(Mexican fruit fly (Willacy primary hap 2023))(info)GCF_028408465.1

Dacinae

Dacini

Bactrocera

Bactrocera tyroni species complex

•Bactrocera neohumeralis(flies B.neohumeralis (Rockhampton 2022))(info)GCF_024586455.1

Bactrocera tryoni

•Bactrocera tryoni(Queensland fruit fly (bent wings 2014))(info)GCA_000695345.1

•Bactrocera tryoni(Queensland fruit fly (S06 2021))(info)GCF_016617805.1

•Bactrocera latifrons(fly B.latifrons)(info)GCF_001853355.1

Bactrocera dorsalis complex

Bactrocera dorsalis

•Bactrocera dorsalis(oriental fruit fly (Fly_Bdor 2022))(info)GCF_023373825.1

•Bactrocera dorsalis(oriental fruit fly (Punador 2014))(info)GCF_000789215.1

Bactrocera zonata species complex

•Bactrocera zonata(peach fruit fly (Israel wild type primary hap 2024))(info)GCA_037783105.1

Daculus

Bactrocera oleae

•Bactrocera oleae(olive fruit fly)(info)GCF_001188975.3

•Bactrocera oleae(olive fruit fly (primary hap 2024))(info)GCF_042242935.1

Zeugodacus

Zeugodacus cucurbitae

•Zeugodacus cucurbitae(melon fly (PBARC_wt_2022May primary hap 2023))(info)GCF_028554725.1

•Zeugodacus cucurbitae(melon fly (v2 USDA-PBARC White Pupae T1 2014))(info)GCF_000806345.2

Ceratitidini

Ceratitis

•Ceratitis capitata(Mediterranean fruit fly)(info)GCF_000347755.3

•Eurosta solidaginis(goldenrod gall fly (ZX-2024a 2024))(info)GCF_040869045.1

•Drosophila albomicans(fly D.albomicans (v2 15112-1751.03 2022))(info)GCF_009650485.2

•Drosophila nasuta(fly D.nasuta (15112-1781.00 2022))(info)GCF_023558535.2

Drosophila sulfurigaster

•Drosophila sulfurigaster albostrigata(fly D.sulfurigaster albostrigata (15112-1811.04 2022))(info)GCF_023558435.1

repleta group

mulleri subgroup

mojavensis species complex

•Drosophila arizonae(fly D.arizonae)(info)GCF_001654025.1

Drosophila mojavensis

•Drosophila mojavensis(fly D.mojavensis (Agencourt 2006))(info)GCF_000005175.2

•Drosophila mojavensis(fly D.mojavensis (Stanford 2021))(info)GCF_018153725.1

•Drosophila navojoa(fly D.navojoa)(info)GCF_001654015.2

hydei subgroup

•Drosophila hydei(fly D.hydei)(info)GCF_003285905.1

quinaria group

Drosophila innubila

•Drosophila innubila(fly D.innubila (TH190305 2019 refseq))(info)GCF_004354385.1

•Drosophila innubila(fly D.innubila (TH190305 2020 genbank))(info)GCA_004354385.2

virilis group

•Drosophila montana(fly D.montana (Dmon_TW-CO22-7 2024))(info)GCF_035044405.1

•Drosophila novamexicana(fly D.novamexicana)(info)GCF_003285875.2

Drosophila virilis

•Drosophila virilis(fly D.virilis)(info)GCF_003285735.1

•Drosophila virilis(fly D.virilis (15010-1051.87 2023))(info)GCF_030788295.1

•Drosophila virilis(fly D.virilis (160 2020))(info)GCA_007989325.2

Sophophora

melanogaster group

ananassae subgroup

ananassae species complex

Drosophila ananassae

•Drosophila ananassae(fly D.ananassae (14024-0371.13 U. Maryland 2021))(info)GCF_017639315.1

•Drosophila ananassae(fly D.ananassae (14024-0371.16-18 U. Chicago 2018))(info)GCF_003285975.2

bipectinata species complex

Drosophila bipectinata

•Drosophila bipectinata(fly D.bipectinata (14024-0381.07 2023))(info)GCF_030179905.1

•Drosophila bipectinata(fly D.bipectinata (BCM 2013))(info)GCF_000236285.1

•Drosophila bipectinata(fly D.bipectinata (Stanford 2021))(info)GCF_018153845.1

suzukii subgroup

Drosophila biarmipes

•Drosophila biarmipes(fly D.biarmipes (BCM 2013))(info)GCF_000233415.1

•Drosophila biarmipes(fly D.biarmipes (raj3 2022))(info)GCF_025231255.1

•Drosophila biarmipes(fly D.biarmipes (Stanford 2021))(info)GCF_018148935.1

•Drosophila subpulchrella(fly D.subpulchrella)(info)GCF_014743375.2

Drosophila suzukii

•Drosophila suzukii(fly D.suzukii)(info)GCF_013340165.1

•Drosophila suzukii(fly D.suzukii (2024))(info)GCF_043229965.1

•Drosophila suzukii(fly D.suzukii (WT10 2024))(info)GCF_037355615.1

elegans subgroup

Drosophila elegans

•Drosophila elegans(fly D.elegans (Baylor 2013))(info)GCF_000224195.1

•Drosophila elegans(fly D.elegans (Stanford 2021))(info)GCF_018152505.1

•Drosophila gunungcola(fruit fly (Sukarami 2022))(info)GCF_025200985.1

{32348}

•in[0.0000]

melanogaster subgroup

•Drosophila erecta(fly D.erecta)(info)GCF_003286155.1

•Drosophila mauritiana(fly D.mauritiana)(info)GCF_004382145.1

•Drosophila melanogaster(fly D.melanogaster)(info)GCF_000001215.4

•Drosophila orena(fly D.orena (14021-0245.01 2019))(info)GCA_005876975.1

•Drosophila santomea(fly D.santomea (v1.1 2021))(info)GCF_016746245.2

•Drosophila sechellia(fly D.sechellia (sech25 v2 2019 UC Irvine))(info)GCF_004382195.2

•Drosophila simulans(fly D.simulans (w501 v3.1 2021))(info)GCF_016746395.2

•Drosophila teissieri(fly D.teissieri)(info)GCF_016746235.2

•Drosophila yakuba(fly D.yakuba (v2 2021))(info)GCF_016746365.2

eugracilis subgroup

Drosophila eugracilis

•Drosophila eugracilis(fly D.eugracilis (modENCODE 2013))(info)GCF_000236325.1

•Drosophila eugracilis(fly D.eugracilis (Stanford 2021))(info)GCF_018153835.1

ficusphila subgroup

Drosophila ficusphila

•Drosophila ficusphila(fly D.ficusphila (BCM 2013))(info)GCF_000220665.1

•Drosophila ficusphila(fly D.ficusphila (Stanford 2021))(info)GCF_018152265.1

montium subgroup

Drosophila kikkawai

•Drosophila kikkawai(fly D.kikkawai (14028-0561.14 2023))(info)GCF_030179895.1

•Drosophila kikkawai(fly D.kikkawai (Baylor 2013))(info)GCF_000224215.1

•Drosophila kikkawai(fly D.kikkawai (Stanford 2021))(info)GCF_018152535.1

•Drosophila leontia(fly D.leontia (RGN 210-13 2019))(info)GCA_008042735.1

Drosophila serrata species complex

•Drosophila serrata(fly D.serrata (v1.1 Fors4 2017))(info)GCF_002093755.2

rhopaloa subgroup

Drosophila rhopaloa

•Drosophila rhopaloa(fly D.rhopaloa (modENCODE 2013))(info)GCF_000236305.1

•Drosophila rhopaloa(fly D.rhopaloa (Stanford 2021))(info)GCF_018152115.1

takahashii subgroup

Drosophila takahashii

•Drosophila takahashii(fly D.takahashii (BCM 2013))(info)GCF_000224235.1

•Drosophila takahashii(fly D.takahashii (IR98-3 E-12201 2023))(info)GCF_030179915.1

•Drosophila takahashii(fly D.takahashii (Stanford 2021))(info)GCF_018152695.1

obscura group

affinis subgroup

•Drosophila azteca(fly D.azteca (UCSD 14012-1071.03 2019))(info)GCA_005876895.1

obscura subgroup

•Drosophila guanche(fly D.guanche)(info)GCF_900245975.1

Drosophila obscura

•Drosophila obscura(fly D.obscura (Stanford 2021))(info)GCF_018151105.1

•Drosophila obscura(fly D.obscura 14011-0151.01)(info)GCF_002217835.1

•Drosophila subobscura(fly D.subobscura)(info)GCF_008121235.1

pseudoobscura subgroup

•Drosophila lowei(fly D.lowei (Jillo6 2019))(info)GCA_008121275.1

•Drosophila miranda(fly D.miranda)(info)GCF_003369915.1

•Drosophila persimilis(fly D.persimilis)(info)GCF_003286085.1

•Drosophila pseudoobscura(fly D.pseudoobscura)(info)GCF_009870125.1

willistoni group

bocainensis subgroup

•Drosophila nebulosa(fly D.nebulosa (14030-0761.06 2022))(info)GCA_024703675.1

•Drosophila sucinea(fly D.sucinea (14030-0791.01 2021))(info)GCA_018150745.1

willistoni subgroup

•Drosophila tropicalis(fly D.tropicalis (14030-0801.00 2023))(info)GCF_018151085.1

Drosophila willistoni

•Drosophila willistoni(fly D.willistoni (14030-0811.24 2021))(info)GCF_018902025.1

•Drosophila willistoni(fly D.willistoni (TSC 14030-0811.24 2006))(info)GCF_000005925.1

Dorsilopha

•Drosophila busckii(fly D.busckii)(info)GCF_011750605.1

•Drosophila grimshawi(fly D.grimshawi (Agencourt 2006))(info)GCF_000005155.2

•Drosophila grimshawi(fly D.grimshawi (Stanford 2021))(info)GCF_018153295.1

Colocasiomyini

Scaptodrosophila

victoria group

•Scaptodrosophila lebanonensis(fly S.lebanonensis)(info)GCF_003285725.1

Diopsoidea

Diopsidae

Teleopsis

•Teleopsis dalmanni(fly T.dalmanni)(info)GCF_002237135.1

•Lucilia cuprina(Australian sheep blowfly)(info)GCF_000699065.1

•Lucilia cuprina(Australian sheep blowfly (Lc7/37 2022))(info)GCF_022045245.1

•Lucilia sericata(common green bottle fly)(info)GCF_015586225.1

Chrysomyinae

Phormini

Phormia

•Phormia regina(black blowfly (Indy2012f 2016))(info)GCA_001735545.1

Chrysomyini

Chrysomya

•Chrysomya rufifacies(hairy maggot blowfly (CPM2020 2020))(info)GCA_014858695.1

Cochliomyia

•Cochliomyia hominivorax(primary screw-worm (J06 Research Colony 2022))(info)GCA_004302925.2

Calliphorinae

Calliphora

•Calliphora vicina(urban bluebottle blowfly (primary hap 2023))(info)GCF_958450345.1

•Musca autumnalis(face fly (F117 2025))(info)GCF_047663935.1

Byomya

•Musca vetustissima(fly M.vetustissima (Yass MV318-11 2023))(info)GCF_032173495.1

Musca

Musca domestica

•Musca domestica(house fly (aabys 2013 refseq))(info)GCF_000371365.1

•Musca domestica(house fly (aabys 2023))(info)GCF_030504385.1

Stomoxyini

Haematobia

•Haematobia irritans(horn fly (KBUSLIRL 2025))(info)GCF_050003625.1

Stomoxys

Stomoxys calcitrans

•Stomoxys calcitrans(stable fly (8C7A2A5H3J4 2015 rewfseq))(info)GCF_001015335.1

•Stomoxys calcitrans(stable fly (primary hap 2023))(info)GCF_963082655.1

•Glossina fuscipes(tsetse fly (v2 IAEA_lab_2018 2020))(info)GCF_014805625.2

•Glossina fuscipes fuscipes(tsetse fly G.fuscipes fuscipes (2014))(info)GCA_000671735.1

Glossina palpalis

•Glossina palpalis gambiensis(tsetse fly G.palpalis gambiensis (146720 2015))(info)GCA_000818775.1

Glossina

•Glossina austeni(tsetse fly G.austeni (2014))(info)GCA_000688735.1

Glossina morsitans

•Glossina morsitans morsitans(tsetse fly G.morsitans morsitans (Yale 2014))(info)GCA_001077435.1

•Glossina pallidipes(tsetse fly G.pallidipes (2014))(info)GCA_000688715.1

Austenina

•Glossina brevipalpis(tsetse fly G.brevipalpis (2014))(info)GCA_000671755.1

•Megaselia abdita(fly M.abdita (Sander 2025))(info)GCA_048544405.1

•Eupeodes corollae(hoverfly E.corollae (primary hap 2022))(info)GCF_945859685.1

Episyrphus

•Episyrphus balteatus(marmalade hoverfly (primary hap 2022))(info)GCF_945859705.1

•Condylostylus longicornis(fly C.longicornis (FDR11 2023))(info)GCF_029603195.1

•Hermetia illucens(fly H.illucens)(info)GCF_905115235.1

•Megachile rotundata(alfalfa leafcutting bee (2011))(info)GCF_000220905.1

•Megachile rotundata(alfalfa leafcutting bee (GNS110a 2025))(info)GCF_050947335.1

Osmiini

Osmia

Osmia lignaria

•Osmia lignaria(orchard mason bee (UT-Olig-1 2020))(info)GCF_012274295.1

•Osmia lignaria lignaria(orchard mason bee (PbOS001 2025))(info)GCF_051020975.1

Osmia bicornis

•Osmia bicornis bicornis(red mason bee (2021))(info)GCF_907164935.1

•Nomia melanderi(Alkali bee (GNS246 2025))(info)GCF_051020985.1

•Nomia melanderi(alkali bee (v1.3 Touchet_males 2018))(info)GCF_003710045.2

Rophitinae

Dufourea

•Dufourea novaeangliae(bee D.novaeangliae)(info)GCF_001272555.1

Halictinae

Halictini

Halictus

•Halictus rubicundus(bee H.rubicundus (RS-2024b primary hap 2025))(info)GCF_050948215.1

Lasioglossum

Evylaeus

•Lasioglossum baleicum(bee L.baleicum (2025))(info)GCF_051020765.1

Augochlorini

Megalopta

Megalopta genalis

•Megalopta genalis(bee M.genalis)(info)GCF_011865705.1

•Megalopta genalis(bee M.genalis (19385.01 primary hap 2025))(info)GCF_051020955.1

•Apis cerana(Asiatic honeybee)(info)GCF_001442555.1

•Apis cerana(Asiatic honeybee (GH-2021 2023))(info)GCF_029169275.1

•Apis dorsata(giant honeybee)(info)GCF_000469605.1

•Apis laboriosa(Himalayan honeybee)(info)GCF_014066325.1

Apis mellifera

•Apis mellifera(honey bee (DH4 2011))(info)GCA_000002195.1

•Apis mellifera(honey bee (DH4 2018))(info)GCF_003254395.2

•Apis florea(little honeybee)(info)GCF_000184785.3

Bombini

Bombus

•Bombus affinis(bee B.affinis (iyBomAffi1 2022))(info)GCF_024516045.1

Bombus fervidus

•Bombus fervidus(bee B.fervidus (BK054 2024))(info)GCF_041682495.1

•Bombus fervidus(bee B.fervidus (BK054 2025))(info)GCF_041682495.2

Bombus terrestris

•Bombus terrestris(buff-tailed bumblebee (2011 BCM))(info)GCF_000214255.1

•Bombus terrestris(buff-tailed bumblebee (2022 Wellcome Sanger))(info)GCF_910591885.1

Pyrobombus

•Bombus bifarius(bee B.bifarius)(info)GCF_011952205.1

•Bombus flavifrons(bee B.flavifrons (JBK064 primary hap 2024))(info)GCF_040668555.1

•Bombus huntii(bee B.huntii (Logan2020A 2022))(info)GCF_024542735.1

Bombus vancouverensis

Bombus vancouverensis nearcticus

•Bombus vancouverensis nearcticus(bee B.vancouverensis nearcticus)(info)GCF_011952275.1

•Bombus vancouverensis nearcticus(bee B.vancouverensis nearcticus (primary hap 2025))(info)GCF_051014615.1

•Bombus vosnesenskii(bee B.vosnesenskii)(info)GCF_011952255.1

•Bombus impatiens(common eastern bumble bee)(info)GCF_000188095.3

Thoracobombus

•Bombus pascuorum(bee B.pascuorum (primary hap 2021))(info)GCF_905332965.1

Melanobombus

•Bombus pyrosoma(bee B.pyrosoma)(info)GCF_014825855.1

Euglossini

Eufriesea

•Eufriesea mexicana(bee E.mexicana (v2 0111107269 2016))(info)GCF_001483705.2

Euglossa

•Euglossa dilemma(dilemma orchid bee (1 2017))(info)GCA_002201625.1

Meliponini

Frieseomelitta

•Frieseomelitta varia(bee F.varia)(info)GCF_011392965.1

Anthophorini

Habropoda

•Habropoda laboriosa(bee H.laboriosa)(info)GCF_001263275.1

•Ceratina calcarata(bee C.calcarata (v2 Rehan_Ccalc_2016 2016))(info)GCF_001652005.2

Xylocopini

Xylocopa

Neoxylocopa

•Xylocopa sonorina(bee X.sonorina (GNS202 primary hap 2025))(info)GCF_050948175.1

Xylocopa

•Xylocopa violacea(bee X.violacea (2024))(info)GCA_963969225.2

•Andrena cerasifolii(bee A.cerasifolii (SP2316 primary hap 2025))(info)GCF_050908995.1

Panurginae

Calliopsini

Calliopsis

•Calliopsis andreniformis(bee C.andreniformis (RMS-2024a primary hap 2025))(info)GCF_051401765.1

Colletidae

Colletinae

Colletes

•Colletes gigas(bee C.gigas)(info)GCF_013123115.1

•Colletes latitarsis(bee C.latitarsis (SP2378_abdomen 2025))(info)GCF_051014445.1

Hylaeinae

Hylaeus

Nesoprosopis

•Hylaeus anthracinus(bee H.anthracinus (JK02 2022))(info)GCF_026225885.1

•Hylaeus volcanicus(bee H.volcanicus (JK05 2022))(info)GCF_026283585.1

Diphaglossinae

Caupolicanini

Ptiloglossa

•Ptiloglossa arizonensis(bee P.arizonensis (GNS036 primary hap 2025))(info)GCF_051014685.1

•Atta cephalotes(ant A.cephalotes)(info)GCF_000143395.1

•Atta colombica(ant A.colombica)(info)GCF_001594045.1

Cyphomyrmex

•Cyphomyrmex costatus(ant C.costatus (v2 MS0001 2016))(info)GCF_001594065.2

Trachymyrmex

•Trachymyrmex cornetzi(ant T.cornetzi (Tcor2-1 v1.1 2016 BGI))(info)GCF_001594075.2

•Trachymyrmex septentrionalis(ant T.septentrionalis)(info)GCF_001594115.1

Mycetomoellerius

•Mycetomoellerius zeteki(ant T.zeteki)(info)GCF_001594055.1

Acromyrmex

•Acromyrmex echinatior(Panamanian leafcutter ant)(info)GCF_000204515.1

Crematogastrini

Cardiocondyla

•Cardiocondyla obscurior(ant C.obscurior (alpha-2009 2024))(info)GCF_019399895.1

Temnothorax

•Temnothorax americanus(ant T.americanus (GAGA-0224 2025))(info)GCF_048541705.1

•Temnothorax curvispinosus(ant T.curvispinosus)(info)GCF_003070985.1

•Temnothorax longispinosus(ant T.longispinosus (EJ_2023e 2024))(info)GCF_030848805.1

•Temnothorax nylanderi(ant T.nylanderi (EJ_2023f 2023))(info)GCF_030848795.1

Stenammini

Vollenhovia

•Vollenhovia emeryi(ant V.emeryi)(info)GCF_000949405.1

Blepharidattini

Wasmannia

•Wasmannia auropunctata(little fire ant)(info)GCF_000956235.1

Solenopsidini

Monomorium

•Monomorium pharaonis(pharaoh ant)(info)GCF_013373865.1

Solenopsis

Solenopsis invicta

•Solenopsis invicta(red fire ant (2018))(info)GCF_000188075.2

•Solenopsis invicta(red fire ant (2021))(info)GCF_016802725.1

Pogonomyrmecini

Pogonomyrmex

•Pogonomyrmex barbatus(red harvester ant)(info)GCF_000187915.1

Formicinae

Lasiini

Anoplolepis

•Anoplolepis gracilipes(ant A.gracilipes (2025))(info)GCF_047496725.1

Nylanderia

•Nylanderia fulva(ant N.fulva (TAMU-Nful-2015 v1.1 2019))(info)GCF_005281655.2

Formicini

Cataglyphis

•Cataglyphis hispanica(ant C.hispanica (Lineage 1 2022))(info)GCF_021464435.1

Formica

•Formica exsecta(ant F.exsecta)(info)GCF_003651465.1

Polyergus

•Polyergus mexicanus(ant P.mexicanus (NDT 795.1 2023))(info)GCF_030449975.1

Camponotini

Camponotus

•Camponotus vicinus(ant C.vicinus (PSW18456_S1 2022))(info)GCA_025532165.1

•Camponotus floridanus(Florida carpenter ant)(info)GCF_003227725.1

Ponerinae

Ponerini

Dinoponera

•Dinoponera quadriceps(ant D.quadriceps)(info)GCF_001313825.1

Odontomachus

•Odontomachus brunneus(ant O.brunneus)(info)GCF_010583005.1

Harpegnathos

•Harpegnathos saltator(Jerdon's jumping ant (DR-91 v8.6 2018))(info)GCF_003227715.2

Pseudomyrmecinae

Pseudomyrmex

•Pseudomyrmex gracilis(ant P.gracilis)(info)GCF_002006095.1

Dolichoderinae

Linepithema

Linepithema humile

•Linepithema humile(Argentine ant)(info)GCF_000217595.1

•Linepithema humile(Argentine ant (Giens D197 2024))(info)GCF_040581485.1

Dorylinae

Ooceraea

•Ooceraea biroi(clonal raider ant)(info)GCF_003672135.1

•Vespa mandarinia(Asian giant hornet)(info)GCF_014083535.2

•Vespa crabro(European hornet (2022))(info)GCF_910589235.1

•Vespa velutina(wasp V.velutina)(info)GCF_912470025.1

Vespula

•Vespula vulgaris(wasp V.vulgaris (2021))(info)GCF_905475345.1

•Vespula pensylvanica(western yellowjacket)(info)GCF_014466175.1

Polistinae

Polistini

Polistes

•Polistes fuscatus(common paper wasp)(info)GCF_010416935.1

•Polistes dominula(European paper wasp)(info)GCF_001465965.1

•Polistes canadensis(red paper wasp)(info)GCF_001313835.1

•Prorops nasuta(wasps, P.nasuta (Cenicafe-Biocafe 2022))(info)GCF_024137725.1

•Cotesia typhae(ant C.typhae (Kobodo isofemale line 2021))(info)GCF_013202065.1

•Cotesia glomerata(wasp C.glomerata (CgM1 2021))(info)GCF_020080835.1

Microplitis

Microplitis demolitor

•Microplitis demolitor(wasp M.demolitor (Queensland-Clemson 2015))(info)GCF_000572035.2

•Microplitis demolitor(wasp M.demolitor (Queensland-Clemson2020A 2023))(info)GCF_026212275.2

•Microplitis mediator(wasp M.mediator (UGA2020A 2023))(info)GCF_029852145.1

Aphidiinae

Aphidius

•Aphidius gifuensis(wasp A.gifuensis)(info)GCF_014905175.1

Cheloninae

Chelonus

•Chelonus insularis(wasp C.insularis)(info)GCF_013357705.1

Opiinae

Diachasma

•Diachasma alloeum(wasp D.alloeum)(info)GCF_001412515.2

Fopius

•Fopius arisanus(wasp F.arisanus)(info)GCF_000806365.1

Diachasmimorpha

•Diachasmimorpha longicaudata(wasps, D.longicaudata (KC_UGA_2023 2023))(info)GCF_034640455.1

•Venturia canescens(wasp V.canescens)(info)GCF_019457755.1

•Nasonia vitripennis(jewel wasp)(info)GCF_009193385.2

Encyrtidae

Encyrtinae

Copidosoma

•Copidosoma floridanum(wasp C.floridanum)(info)GCF_000648655.2

•Ceratosolen solmsi marchali(wasp C.solmsi marchali (v2 2013))(info)GCF_000503995.2

Eulophidae

Tetrastichinae

Phymastichus

•Phymastichus coffea(wasp P.coffea (CEN01 2022))(info)GCF_024137745.1

Trichogrammatidae

Trichogramma

•Trichogramma pretiosum(wasp T.pretiosum)(info)GCF_000599845.2

•Belonocnema kinseyi(wasp B.treatae)(info)GCF_010883055.1

Figitidae

Eucoilinae

Leptopilina

•Leptopilina boulardi(wasp L.boulardi (dan_hultmark-lab 2021))(info)GCF_019393585.1

•Leptopilina heterotoma(wasp L.heterotoma)(info)GCF_015476425.1

•Athalia rosae(coleseed sawfly (2021 Wellcome Sanger))(info)GCF_917208135.1

•Athalia rosae(coleseed sawfly (CS-ADULT 2019 i5k))(info)GCF_000344095.2

Diprionidae

Diprioninae

Diprion

•Diprion similis(hymenopterans (iyDipSimi1 2021))(info)GCF_021155765.1

Neodiprion

•Neodiprion fabricii(hymenopterans (iyNeoFabr1 2021))(info)GCF_021155785.1

•Neodiprion virginianus(hymenopterans (iyNeoVirg1 2022))(info)GCF_021901495.1

Neodiprion lecontei

•Neodiprion lecontei(redheaded pine sawfly)(info)GCF_001263575.1

•Neodiprion lecontei(redheaded pine sawfly (iyNeoLeco1 2022))(info)GCF_021901455.1

Neodiprion pinetum

•Neodiprion pinetum(white pine sawfly (iyNeoPine1 2021))(info)GCF_021155775.1

•Neodiprion pinetum(white pine sawfly (iyNeoPine1 2024))(info)GCF_021155775.2

Orussoidea

Orussidae

Orussus

•Orussus abietinus(hymenopterans O.abietinus)(info)GCF_000612105.2

Cephoidea

Cephidae

Cephus

•Cephus cinctus(wheat stem sawfly (v2 2014))(info)GCF_000341935.2

•Anoplophora glabripennis(Asian longhorned beetle)(info)GCF_000390285.2

•Diabrotica undecimpunctata(beetle D.undecimpunctata (CICGRU primary hap 2024))(info)GCF_040954645.1

Diabrotica virgifera

Diabrotica virgifera virgifera

•Diabrotica virgifera virgifera(western corn rootworm (2022))(info)GCF_917563875.1

•Diabrotica virgifera virgifera(western corn rootworm (Ped12-6-A-3 2018))(info)GCF_003013835.1

Galerucini

Atysites

Diorhabda

•Diorhabda carinata(larger tamarisk beetle (Uzbek primary hap 2023))(info)GCA_029229535.1

•Diorhabda elongata(Mediterranean tamarisk beetle (Crete 2022))(info)GCA_026230145.1

•Diorhabda carinulata(northern tamarisk beetle (Delta primary hap 2022))(info)GCF_026250575.1

•Diorhabda sublineata(subtropical tamarisk beetle (icDioSubl1.1 primary hap 2022))(info)GCF_026230105.1

Chrysomelinae

Doryphorini

Leptinotarsa

Leptinotarsa decemlineata

•Leptinotarsa decemlineata(Colorado potato beetle)(info)GCF_000500325.1

•Leptinotarsa decemlineata(Colorado potato beetle (2022))(info)GCF_025532065.1

•Euwallacea fornicatus(beetle E.fornicatus (EFF26 2024))(info)GCF_040115645.1

•Euwallacea similis(beetle E.similis (ESF13 2024))(info)GCF_039881205.1

Dendroctonus

Dendroctonus ponderosae

•Dendroctonus ponderosae(mountain pine beetle (2013))(info)GCF_000355655.1

•Dendroctonus ponderosae(mountain pine beetle (2021))(info)GCF_020466585.1

•Anthonomus grandis grandis(boll weevil (2022))(info)GCF_022605725.1

Dryophthorinae

Rhynchophorus

•Rhynchophorus ferrugineus(red palm weevil (W39M 2023))(info)GCF_030347505.1

Sitophilus

•Sitophilus oryzae(rice weevil)(info)GCF_002938485.1

Brentidae

Cyladinae

Cylas

•Cylas formicarius(sweet potato weevil (icCylForm1 primary hap 2023))(info)GCF_029955315.1

•Harmonia axyridis(beetle H.axyridis)(info)GCF_914767665.1

Coccinella

•Coccinella septempunctata(seven-spotted ladybird)(info)GCF_907165205.1

•Zophobas morio(beetle Z.morio (UQ-CSIRO AGI-343-1 2024))(info)GCF_036711695.1

Tenebrio

•Tenebrio molitor(yellow mealworm (2024))(info)GCF_963966145.1

Tenebrionidae incertae sedis

Tribolium

•Tribolium madens(black flour beetle)(info)GCF_015345945.1

Tribolium castaneum

•Tribolium castaneum(red flour beetle)(info)GCF_000002335.3

•Tribolium castaneum(red flour beetle (GA2 primary hap 2023))(info)GCF_031307605.1

•Aethina tumida(small hive beetle (BRL-Maryland 2017))(info)GCF_001937115.1

•Aethina tumida(small hive beetle (Nest 87 primary hap 2022))(info)GCF_024364675.1

•Dalotia coriaria(beetle D.coriaria (IRGN ID8LTWV9N9 2023))(info)GCF_025399875.1

Silphidae

Nicrophorinae

Nicrophorus

•Nicrophorus vespilloides(beetle N.vespilloides)(info)GCF_001412225.1

•Onthophagus taurus(beetle O.taurus)(info)GCF_000648695.1

•Onthophagus taurus(beetle O.taurus (NC 2024))(info)GCF_036711975.1

•Photinus pyralis(common eastern firefly)(info)GCF_008802855.1

•Agrilus planipennis(emerald ash borer)(info)GCF_000699045.2

•Ctenocephalides felis(cat flea)(info)GCF_003426905.1

•Chrysoperla carnea(common green lacewing)(info)GCF_905475395.1

•Periplaneta americana(American cockroach (PAMFEO1 primary hap 2024))(info)GCF_040183065.1

•Cryptotermes secundus(termite C.secundus)(info)GCF_002891405.2

•Zootermopsis nevadensis(termite Z.nevadensis)(info)GCF_000696155.1

•Blattella germanica(German cockroach (American Cyanamid = Orlando Normal EBB2017 2018))(info)GCA_003018175.1

•Blattella germanica(German cockroach (v2.0 2018))(info)GCA_000762945.2

•Schistocerca americana(American grasshopper (TAMUIC-IGC-003095 2022))(info)GCF_021461395.2

•Schistocerca piceifrons(Central American locust (TAMUIC-IGC-003096 2022))(info)GCF_021461385.2

•Schistocerca gregaria(desert locust (iqSchGreg1 primary hap 2022))(info)GCF_023897955.1

Schistocerca serialis

•Schistocerca serialis cubense(grasshoppers S.serialis cubense (TAMUIC-IGC-003099 2022))(info)GCF_023864345.2

•Schistocerca cancellata(South American locust (TAMUIC-IGC-003103 2022))(info)GCF_023864275.1

•Schistocerca nitens(vagrant locust (TAMUIC-IGC-003100 2022))(info)GCF_023898315.1

•Anabrus simplex(Mormon cricket (iqAnaSimp1 primary hap 2024))(info)GCF_040414725.1

•Gryllus bimaculatus(two-spotted cricket (white eyes 2021))(info)GCA_017312745.1

•Bacillus rossius redtenbacheri(walking B.rossius redtenbacheri (Brsri 2023))(info)GCF_032445375.1

•Cinara cedri(aphids C.cedri (2019))(info)GCA_902439185.1

Drepanosiphinae

Drepanosiphum

•Drepanosiphum platanoidis(aphids D.platanoidis (primary hap 2023))(info)GCA_948098885.1

Aphidinae

Aphidini

Melanaphis

•Melanaphis sacchari(aphids M.sacchari (LSU 2018))(info)GCF_002803265.2

Rhopalosiphum

Rhopalosiphum padi complex

Rhopalosiphum padi

•Rhopalosiphum padi(bird cherry-oat aphid (Rp-YL-2016 2021))(info)GCA_019425515.1

•Rhopalosiphum padi(bird cherry-oat aphid (XX-2018 2021))(info)GCF_020882245.1

•Rhopalosiphum maidis(corn leaf aphid)(info)GCF_003676215.2

Aphis

Aphis gossypii

•Aphis gossypii(cotton aphid (2022))(info)GCA_917880025.4

•Aphis gossypii(cotton aphid (AGOS-L3 2019))(info)GCF_004010815.1

•Aphis gossypii(cotton aphid (Hap1 2021))(info)GCF_020184175.1

•Aphis gossypii(cotton aphid (Hap3 2021))(info)GCA_020184165.1

•Aphis glycines(soybean aphid (OH 2020))(info)GCA_009928515.1

Macrosiphini

Sitobion

•Sitobion miscanthi(aphids S.miscanthi (Langfang-1 2019))(info)GCA_008086715.1

Sitobion avenae

•Sitobion avenae(English grain aphid (Sa-YL-2016 2021))(info)GCA_019425605.1

•Sitobion avenae(English grain aphid (SaG1 2022))(info)GCA_022419445.1

Myzus

•Myzus persicae(green peach aphid)(info)GCF_001856785.1

Acyrthosiphon

•Acyrthosiphon pisum(pea aphid (AL4f v2 2019))(info)GCF_005508785.2

Aulacorthum

•Aulacorthum solani(potato aphid (AS-CPRI-2016 2019))(info)GCA_008528875.1

Macrosiphum

•Macrosiphum rosae(rose aphid (ROC1 2021))(info)GCA_016617965.1

Metopolophium

•Metopolophium dirhodum(rose-grain aphid (CAU 2021 refseq))(info)GCF_019925205.1

Diuraphis

Diuraphis noxia

•Diuraphis noxia(Russian wheat aphid (2015))(info)GCA_001465515.1

•Diuraphis noxia(Russian wheat aphid (RWA2 2015))(info)GCF_001186385.1

Eriosomatinae

Fordini

Schlechtendalia

•Schlechtendalia chinensis(horned gall aphid (SC2021 2021))(info)GCA_019022885.1

Eriosomatini

Eriosoma

•Eriosoma lanigerum(woolly apple aphid (AA05 2020))(info)GCA_013282895.1

Chaitophorinae

Sipha

•Sipha flava(yellow sugarcane aphid)(info)GCF_003268045.1

Hormaphididae

Hormaphidini

Hormaphis

•Hormaphis cornu(aphids H.cornu (80 2021))(info)GCA_017140985.1

Phylloxeroidea

Phylloxeridae

Daktulosphaira

•Daktulosphaira vitifoliae(grape phylloxera (Bord-2020 2022 refseq))(info)GCF_025091365.1

Adelgidae

Adelges

Gilletteella

•Adelges cooleyi(spruce gall adelgid (2022))(info)GCF_023614345.1

•Diaphorina citri(Asian citrus psyllid)(info)GCF_000475195.1

Coccoidea

Pseudococcidae

Planococcus

•Planococcus citri(citrus mealybug (primary hap 2023))(info)GCF_950023065.1

•Bemisia tabaci(sweet potato whitefly)(info)GCF_001854935.1

•Bemisia tabaci(sweet potato whitefly (2022))(info)GCF_918797505.1

•Macrosteles quadrilineatus(aster leafhopper (MER2022 2023))(info)GCF_028750875.1

Cicadellinae

Proconiini

Homalodisca

•Homalodisca vitripennis(glassy-winged sharpshooter (AUS2020 2022))(info)GCF_021130785.1

•Nilaparvata lugens(brown planthopper (NLH13 2014))(info)GCF_000757685.1

•Nilaparvata lugens(brown planthopper (v2 BPH 2020))(info)GCF_014356525.2

Sogatella

•Sogatella furcifera(white-backed planthopper (WBPH 2020))(info)GCA_014356515.1

Criomorphinae

Laodelphax

Laodelphax striatellus

•Laodelphax striatellus(small brown planthopper (Lst14 2019))(info)GCA_003335185.2

•Laodelphax striatellus(small brown planthopper (SBPH 2020))(info)GCA_014465815.1

•Lycorma delicatula(spotted lanternfly (Av1 hap1 2025 genbank))(info)GCA_047948215.1

•Lycorma delicatula(spotted lanternfly (Av1 hap1 2025 refseq))(info)GCF_047948215.1

•Lycorma delicatula(spotted lanternfly (Av1 hap2 2025))(info)GCA_047948205.1

•Cimex lectularius(bed bug)(info)GCF_000648675.2

•Apolygus lucorum(bugs A.lucorum (12Hb 2020))(info)GCA_009739505.2

•Rhodnius prolixus(bugs R.prolixus (2015))(info)GCA_000181055.3

•Rhodnius prolixus(bugs R.prolixus (KJV_2025 2025))(info)GCF_049639745.1

Triatoma

•Triatoma infestans(bugs T.infestans (FIOC_28 2020))(info)GCA_011037195.1

•Halyomorpha halys(brown marmorated stink bug)(info)GCF_000696795.2

•Halyomorpha halys(brown marmorated stink bug (HHAL.00 2019))(info)GCF_000696795.3

•Gerris buenoi(water strider (GBUE.00 2018))(info)GCA_001010745.2

•Pediculus humanus corporis(human body louse)(info)GCF_000006295.1

Ischnocera

Philopteridae

Columbicola

•Columbicola columbae(slender pigeon louse (jgb_00001 2021))(info)GCA_016920875.1

•Thrips palmi(thrips T.palmi)(info)GCF_012932325.1

Frankliniella

•Frankliniella occidentalis(western flower thrips (v3 FOCC.00 2019))(info)GCF_000697945.3

•Hetaerina americana(American ruby spot damselfly (1083.01 alternate hap 2022))(info)GCA_022747625.1

•Hetaerina americana(American ruby spot damselfly (1083.01 primary hap 2022))(info)GCA_022747635.1

•Hetaerina americana(American ruby spot damselfly (primary hap 2022))(info)GCF_022747635.1

Coenagrionoidea

Coenagrionidae

Ischnura

•Ischnura elegans(damselflies)(info)GCF_921293095.1

•Cloeon dipterum(fly C.dipterum (primary hap 2023))(info)GCF_949628265.1

•Cloeon dipterum(mayflies C.dipterum (2020))(info)GCA_902829235.1

Neocloeon

•Neocloeon triangulifer(mayflies N.triangulifer (White Clay Creek 2 clone 2023))(info)GCF_031216515.1

•Folsomia candida(springtails F.candida)(info)GCF_002217175.1

•Homarus americanus(American lobster)(info)GCF_018991925.1

•Homarus gammarus(European lobster (2023))(info)GCA_958450375.1

Parastacoidea

Parastacidae

Cherax

Cherax quadricarinatus

•Cherax quadricarinatus(Australian red claw crayfish (HC-2022 2022))(info)GCF_026875155.1

•Cherax quadricarinatus(Australian red claw crayfish (ZL_2023a 2024))(info)GCF_038502225.1

•Procambarus virginalis(crustacean P.virginalis (Petshop 2018 2021))(info)GCA_020271785.1

Procambarus clarkii

•Procambarus clarkii(red swamp crayfish (CNS0578487 2024))(info)GCF_040958095.1

•Procambarus clarkii(red swamp crayfish (Jiangsu 2021))(info)GCF_020424385.1

•Eriocheir sinensis(Chinese mitten crab (Jianghai 21 2022))(info)GCF_024679095.1

•Eriocheir sinensis(Chinese mitten crab (nwpu-v1-2020 2020))(info)GCA_013436485.1

•Scylla paramamosain(green mud crab (STU-SP2022 2024))(info)GCF_035594125.1

Portunus

•Portunus trituberculatus(swimming crab)(info)GCF_017591435.1

•Palaemon carinicauda(crustacean P.carinicauda (YSFRI2023 2024))(info)GCF_036898095.1

Macrobrachium

•Macrobrachium rosenbergii(giant freshwater prawn (ZJJX-2024 2024))(info)GCF_040412425.1

•Macrobrachium nipponense(oriental river prawn (v2 FS-2020 2020 refseq))(info)GCF_015104395.2

•Panulirus ornatus(crustacean P.ornatus (Po-2019 2024))(info)GCF_036320965.1

•Penaeus monodon(black tiger shrimp (v2 SGIC_2016 2020))(info)GCF_015228065.2

•Penaeus indicus(crustacean P.indicus (CIBA_PI_04 2021))(info)GCF_018983055.1

•Penaeus japonicus(crustacean P.japonicus)(info)GCF_017312705.1

•Penaeus chinensis(fleshy prawn (Huanghai No. 1 2021))(info)GCF_019202785.1

Penaeus vannamei

•Penaeus vannamei(Pacific white shrimp (JL-2024 2024))(info)GCF_042767895.1

•Penaeus vannamei(Pacific white shrimp (Kehai No.1 2018))(info)GCF_003789085.1

•Hyalella azteca(amphipods H.azteca (HAZT.00-mixed v2.0.2 2019))(info)GCF_000764305.2

Hyaloidea

Hyalidae

Parhyale

•Parhyale hawaiensis(amphipods P.hawaiensis (Chicago-F 2018))(info)GCA_001587735.2

•Oratosquilla oratoria(Japanese mantis shrimp (Oo_2021 2025))(info)GCF_046742065.1

•Amphibalanus amphitrite(crustacean A.amphitrite)(info)GCF_019059575.1

Pollicipedomorpha

Pollicipedidae

Pollicipes

•Pollicipes pollicipes(crustacean P.pollicipes (v3 AB1234 2020))(info)GCF_011947565.3

•Eurytemora carolleeae(crustacean E.affinis)(info)GCF_000591075.1

Lepeophtheirus salmonis

•Lepeophtheirus salmonis(salmon louse (2023))(info)GCF_016086655.4

•Lepeophtheirus salmonis(salmon louse (v1.2 2020))(info)GCF_016086655.3

Harpacticoida

Harpacticidae

Tigriopus

•Tigriopus californicus(tidepool copepod (San Diego 2019 refseq))(info)GCF_007210705.1

•Daphnia pulex(common water flea (KAP4 2021))(info)GCF_021134715.1

•Daphnia carinata(crustacean D.carinata (v2 CSIRO-1 2023))(info)GCF_022539665.2

Daphnia magna

•Daphnia magna(crustacean D.magna (NIES Sungkyunkwan U. 2021))(info)GCF_020631705.1

•Daphnia magna(crustacean D.magna (SK Sungkyunkwan U. 2019 refseq))(info)GCF_003990815.1

•Daphnia magna(water flea D.magna (LRV0_1 2023))(info)GCA_030254905.1

•Daphnia pulicaria(crustacean D.pulicaria (SC F1-1A 2022))(info)GCF_021234035.1

Notostraca

Triopsidae

Lepidurus

•Lepidurus packardi(vernal pool tadpole shrimp L.packardi (LEPA_1 2022))(info)GCA_023053545.1

•Artemia franciscana(crustacean A.franciscana (2023))(info)GCF_032884065.1

Branchinectidae

Branchinecta

•Branchinecta lindahli(vernal pool fairy shrimp B.lindahli (BRLI_1 2022))(info)GCA_023053555.1

•Branchinecta lynchi(vernal pool fairy shrimp B.lynchi (BRLY_001 2022))(info)GCA_023053575.1

•Dermacentor variabilis(American dog tick (Ectoservices 2025))(info)GCF_050947875.1

Dermacentor albipictus

•Dermacentor albipictus(mite/tick D.albipictus (v1 Rhodes 1998 colony primary hap 2024))(info)GCF_038994185.1

•Dermacentor albipictus(mite/tick D.albipictus (v2 Rhodes 1998 colony primary hap 2024))(info)GCF_038994185.2

Dermacentor andersoni

•Dermacentor andersoni(mite/tick D.andersoni (primary hap 2024))(info)GCF_023375885.2

•Dermacentor andersoni(mite/tick D.andersoni (qqDerAnde1 alternate hap 2022))(info)GCA_023375915.1

•Dermacentor andersoni(mites & ticks D.andersoni (primary hap 2022))(info)GCF_023375885.1

•Dermacentor silvarum(mites & ticks D.silvarum (v2 Dsil-2018 2022))(info)GCF_013339745.2

Rhipicephalus

Rhipicephalus sanguineus group

•Rhipicephalus sanguineus(brown dog tick (v1.4 Rsan-2018 2022))(info)GCF_013339695.2

Boophilus

•Rhipicephalus annulatus(mite/tick R.annulatus (Klein Grass 2020))(info)GCA_013436015.1

Rhipicephalus microplus

•Rhipicephalus microplus(southern cattle tick (Deutch F79 2024))(info)GCF_043290135.1

•Rhipicephalus microplus(southern cattle tick (Deutsch 2012))(info)GCA_000181235.2

•Rhipicephalus microplus(southern cattle tick (Deutsch 2020))(info)GCA_013435995.1

•Rhipicephalus microplus(southern cattle tick (Rmic-2018 2020 refseq))(info)GCF_013339725.1

Ixodinae

Ixodes

Ixodes scapularis

•Ixodes scapularis(black-legged tick (JCVI 2018))(info)GCF_002892825.2

•Ixodes scapularis(black-legged tick (U.Maryland v2 2021))(info)GCF_016920785.2

•Ixodes scapularis(black-legged tick (Wikel colony 2008 refseq))(info)GCF_000208615.1

•Ixodes ricinus(castor bean tick (Charles River 2016))(info)GCA_000973045.2

•Ixodes persulcatus(taiga tick (Iper-2018 2020))(info)GCA_013358835.2

Amblyomminae

Amblyomma

•Amblyomma maculatum(Gulf Coast tick (SK-2019 2022))(info)GCA_023969395.1

Haemaphysalinae

Haemaphysalis

•Haemaphysalis longicornis(longhorned tick (HaeL-2018 2020))(info)GCA_013339765.2

Hyalomminae

Hyalomma

•Hyalomma asiaticum(mite/tick H.asiaticum (Hyas-2018 2020))(info)GCA_013339685.2

Argasidae

Ornithodorinae

Ornithodoros

•Ornithodoros turicata(mite/tick O.turicata (Travis 2024))(info)GCF_037126465.1

•Varroa destructor(honeybee mite (v2 2017))(info)GCF_002443255.2

•Varroa jacobsoni(mites & ticks V.jacobsoni (v2 VJ856 2017))(info)GCF_002532875.2

•Galendromus occidentalis(western predatory mite (v1.1 2012))(info)GCF_000255335.2

Dermatophagoides farinae

•Dermatophagoides farinae(American house dust mite (JKM2019 2021))(info)GCF_020809275.1

•Dermatophagoides farinae(American house dust mite (YC_2012a 2022))(info)GCF_024713945.1

Dermatophagoides pteronyssinus

•Dermatophagoides pteronyssinus(European house dust mite (airmid 2017))(info)GCF_001901225.1

•Dermatophagoides pteronyssinus(European house dust mite (colony J.1.1.1.1 2023))(info)GCF_027571235.1

•Sarcoptes scabiei(mite/tick S.scabiei (Arlian Lab 2015))(info)GCA_000828355.1

•Oppia nitens(mites & ticks O.nitens (2023))(info)GCF_028296485.1

•Panonychus citri(citrus red mite (McGregor SS 2020))(info)GCF_014898815.1

Tetranychus

•Tetranychus urticae(two-spotted spider mite)(info)GCF_000239435.1

Tenuipalpidae

Brevipalpus

•Brevipalpus obovatus(mite/tick B.obovatus (LL-2025a 2025))(info)GCF_050580445.1

•Leptotrombidium deliense(scrub typhus mite (UoL-UT 2018))(info)GCA_003675905.2

•Centruroides sculpturatus(bark scorpion)(info)GCF_000671375.1

•Centruroides vittatus(scorpions C.vittatus (TY-2023 2023))(info)GCF_030686945.1

Parasteatoda tepidariorum

•Parasteatoda tepidariorum(common house spider (v3 Goettingen 2019 refseq))(info)GCF_000365465.3

•Parasteatoda tepidariorum(common house spider (YZ-2023 2024))(info)GCF_043381705.1

Nephilidae

Trichonephila

•Trichonephila clavipes(golden silk orb-weaver (2021))(info)GCA_019973935.1

Tetragnathidae

Tetragnatha

Tetragnatha versicolor

•Tetragnatha versicolor(longjawed orb weaver (CCGP_RG_IND1 alternate hap 2022))(info)GCA_024610695.1

•Tetragnatha versicolor(longjawed orb weaver (CCGP_RG_IND1 primary hap 2022))(info)GCA_024610705.1

Araneidae

Argiope

•Argiope bruennichi(wasp spider (primary hap 2022))(info)GCF_947563725.1

Deinopoidea

Uloboridae

Uloborus

•Uloborus diversus(spiders U.diversus (005 2022))(info)GCF_026930045.1

Eresoidea

Eresidae

Stegodyphus

•Stegodyphus dumicola(velvet spider S.dumicola (v2 Namibia, Etosha AA2019 2020))(info)GCF_010614865.2

•Limulus polyphemus(Atlantic horseshoe crab)(info)GCF_000517525.1

Tachypleus

•Tachypleus tridentatus(Chinese horseshoe crab (NWPU-2018 2019))(info)GCF_004210375.1

•Hypsibius dujardini(H.dujardini tardigrades (Sciento 2016))(info)GCA_001579985.1

•Hypsibius exemplaris(H.dujardini tardigrades (Z151 2017))(info)GCA_002082055.1

Ramazzottiidae

Ramazzottius

•Ramazzottius varieornatus(R.varieornatus (YOKOZUNA-1 2016 tardigrades))(info)GCA_001949185.1

Isohypsibioidea

Isohypsibiidae

Isohypsibius

•Isohypsibius dastychi(I.dastychi tardigrades (Gr-Tar-00864 2023))(info)GCA_034696485.1

Macrobiotoidea

Macrobiotidae

Paramacrobiotus

•Paramacrobiotus metropolitanus(P.metropolitanus (2021 tardigrades))(info)GCF_019649055.1

Paramacrobiotus richtersi group

•Paramacrobiotus richtersi(P.richtersi tardigrades (Gr-Tar-00820 2023))(info)GCA_034698045.1

•Epiperipatus broadwayi(Trinidad velvet worm (MCZ IZ 143930 2023))(info)GCA_028023455.1

•Loa loa(African eye worm (CAT 2014))(info)GCA_000733445.1

•Loa loa(eye worm)(info)GCF_000183805.2

Brugia

•Brugia malayi(B.malayi (v4 2019 agent of lymphatic filariasis))(info)GCF_000002995.4

•Brugia pahangi(nematode B.pahangi (2018))(info)GCA_900618355.1

•Brugia timori(nematode B.timori (2018))(info)GCA_900618025.1

Dirofilaria

Dirofilaria immitis

•Dirofilaria immitis(dog heartworm nematode (2013))(info)GCA_001077395.1

•Dirofilaria immitis(dog heartworm nematode (North_Portugal 2022))(info)GCA_024305405.1

Acanthocheilonema

•Acanthocheilonema viteae(nematode A.viteae (2018))(info)GCA_900537255.1

Cercopithifilaria

•Cercopithifilaria johnstoni(nematode C.johnstoni (2021))(info)GCA_916381525.1

Elaeophora

•Elaeophora elaphi(nematode E.elaphi (2013))(info)GCA_000499685.1

Litomosoides

•Litomosoides sigmodontis(nematode L.sigmodontis (2018))(info)GCA_900537275.1

Onchocerca

Onchocerca flexuosa

•Onchocerca flexuosa(nematode O.flexuosa (2018))(info)GCA_900618345.1

•Onchocerca flexuosa(nematode O.flexuosa (Red Deer 2017))(info)GCA_002249935.1

Onchocerca ochengi

•Onchocerca ochengi(nematode O.ochengi (2016))(info)GCA_000950515.2

•Onchocerca ochengi(nematode O.ochengi (2018))(info)GCA_900537205.1

•Onchocerca volvulus(nematode O.volvulus (2014))(info)GCA_000499405.2

Wuchereria

Wuchereria bancrofti

•Wuchereria bancrofti(Wuchereria bancrofti (2018))(info)GCA_900622535.1

•Wuchereria bancrofti(Wuchereria bancrofti (PNG22 2016))(info)GCA_001555675.1

Setariidae

Setaria

•Setaria digitata(nematode S.digitata (RSCHEM2018 2018))(info)GCA_003640385.1

Spiruroidea

Gongylonematidae

Gongylonema

•Gongylonema pulchrum(nematode G.pulchrum (2018))(info)GCA_900617915.1

Thelazioidea

Thelaziidae

Thelazia

•Thelazia callipaeda(thelaziosis nematode (2018))(info)GCA_900618365.1

•Toxocara canis(dog roundworm (2018))(info)GCA_900622545.1

•Toxocara canis(dog roundworm (PN_DK_2014 2014))(info)GCA_000803305.1

Anisakidae

Anisakis

Anisakis simplex complex

•Anisakis simplex(herring worm (2018))(info)GCA_900617985.1

Ascarididae

Parascaris

•Parascaris univalens(nematode P.univalens (PG01 2017))(info)GCA_002259205.1

Ascaris

Ascaris suum

•Ascaris suum(pig roundworm (2012))(info)GCA_000298755.1

•Ascaris suum(pig roundworm (AG01 2017))(info)GCA_000187025.3

Dracunculoidea

Dracunculidae

Dracunculus

•Dracunculus medinensis(Guinea worm (2018))(info)GCA_900625125.1

•Enterobius vermicularis(human pinworm (2018))(info)GCA_900576705.1

•Angiostrongylus costaricensis(American rat lungworm (Costa Rica 2018))(info)GCA_900624975.1

•Angiostrongylus vasorum(French heartworm (ZH-2019-22 2021))(info)GCA_018806985.1

•Angiostrongylus cantonensis(rat lungworm (Guangzhou 2019))(info)GCA_009735665.1

Dictyocaulus

•Dictyocaulus viviparus(bovine lungworm (HannoverDv2000 2015))(info)GCA_000816705.1

Parelaphostrongylus

•Parelaphostrongylus tenuis(nematode P.tenuis (MNPRO001-30 2021))(info)GCA_019055375.1

Trichostrongylidae

Haemonchus

Haemonchus contortus

•Haemonchus contortus(barber pole worm (ISE/inbred ISE 2018))(info)GCA_000469685.2

•Haemonchus contortus(barber pole worm (McMaster 2013))(info)GCA_000442195.1

•Haemonchus placei(nematode H.placei (MHpl1 2018))(info)GCA_900617895.1

Teladorsagia

•Teladorsagia circumcincta(nematode T.circumcincta (S 2017))(info)GCA_002352805.1

Strongylidae

Strongylus

•Strongylus vulgaris(bloodworm (2018))(info)GCA_900624965.1

Cylicostephanus

•Cylicostephanus goldi(nematode C.goldi (2018))(info)GCA_900617965.1

Cylicocyclus

•Cylicocyclus nassatus(nematode C.nassatus (Nouzilly 2023))(info)GCA_958299035.1

Oesophagostomum

•Oesophagostomum dentatum(nodular worm (OD-Hann 2014))(info)GCA_000797555.1

Ancylostomatidae

Ancylostomatinae

Ancylostoma

•Ancylostoma caninum(dog hookworm (Baltimore 2018))(info)GCA_003336725.1

Ancylostoma ceylanicum

•Ancylostoma ceylanicum(nematode A.ceylanicum (2013))(info)GCA_000402015.1

•Ancylostoma ceylanicum(nematode A.ceylanicum (HY135 2014))(info)GCA_000688135.1

•Ancylostoma duodenale(nematode A.duodenale (Zhejiang 2015))(info)GCA_000816745.1

Bunostominae

Necator

Necator americanus

•Necator americanus(nematode N.americanus (2013))(info)GCF_000507365.1

•Necator americanus(New World hookworm (2013))(info)GCA_000507365.1

•Necator americanus(New World hookworm (Aroian 2023))(info)GCF_031761385.1

Heterorhabditidae

Heterorhabditis

•Heterorhabditis bacteriophora(nematode H.bacteriophora (M31e 2011))(info)GCA_000223415.1

Heligmosomidae

Heligmosomoides

Heligmosomoides polygyrus

•Heligmosomoides polygyrus(nematode H.polygyrus (2018))(info)GCA_900618505.1

•Heligmosomoides polygyrus bakeri(nematode H.polygyrus bakeri (2016))(info)GCA_900096555.1

Nippostrongylus

Nippostrongylus brasiliensis

•Nippostrongylus brasiliensis(nematode N.brasiliensis (2018))(info)GCA_900618405.1

•Nippostrongylus brasiliensis(nematode N.brasiliensis (MIMR 2023))(info)GCA_030553155.1

Rhabditoidea

Rhabditidae

Rhabditidae incertae sedis

Auanema

unclassified Auanema

•Auanema sp. JU1783(nematode A.sp. (JU1783 2022))(info)GCA_943334845.2

Diploscapter

•Diploscapter pachys(nematode D.pachys (PF1309 2017))(info)GCA_002287525.1

Peloderinae

Caenorhabditis

•Caenorhabditis angaria(nematode C.angaria (PS1010 2010))(info)GCA_000165025.1

•Caenorhabditis auriculariae(nematode C.auriculariae (NKZ352 2022))(info)GCA_904845305.1

•Caenorhabditis becei(nematode C.becei (QG2083 2019))(info)GCA_900536315.3

•Caenorhabditis bovis(nematode C.bovis (2020))(info)GCA_902829315.1

•Caenorhabditis brenneri(nematode C.brenneri (PB2801 2010))(info)GCA_000143925.2

Caenorhabditis briggsae

•Caenorhabditis briggsae(nematode C.briggsae (AF16 CB4 2014))(info)GCF_000004555.2

•Caenorhabditis briggsae(nematode C.briggsae (QX1410_ONT 2022))(info)GCA_021491975.1

Caenorhabditis elegans

•Caenorhabditis elegans(nematode C.elegans (Bristol N2 2013))(info)GCA_000002985.3

•Caenorhabditis elegans(roundworm)(info)GCF_000002985.6

•Caenorhabditis inopinata(nematode C.inopinata)(info)GCA_003052745.1

•Caenorhabditis japonica(nematode C.japonica (DF5081 2010))(info)GCA_000147155.1

•Caenorhabditis latens(nematode C.latens (PX534 2023))(info)GCA_002259235.3

•Caenorhabditis nigoni(nematode C.nigoni (JU1422 2017))(info)GCA_002742825.1

•Caenorhabditis panamensis(nematode C.panamensis (QG2080 2018))(info)GCA_900536275.1

Caenorhabditis remanei

•Caenorhabditis remanei(nematode C.remanei (PB4641 2007))(info)GCF_000149515.1

•Caenorhabditis remanei(nematode C.remanei (PX356 2023))(info)GCA_001643735.4

•Caenorhabditis remanei(nematode C.remanei (PX439 2023))(info)GCA_002259225.3

•Caenorhabditis remanei(nematode C.remanei (PX506 2020 genbank))(info)GCA_010183535.1

•Caenorhabditis remanei(nematode C.remanei (PX506 2020 refseq))(info)GCF_010183535.1

unclassified Caenorhabditis

•Caenorhabditis sp. 21 LS-2015(nematode C.sp. 21 LS-2015 (NIC534 2019))(info)GCA_900536235.3

•Caenorhabditis sp. 26 LS-2015(nematode C.sp. 26 LS-2015 (JU2190 2019))(info)GCA_900536285.3

•Caenorhabditis sp. 31 LS-2015(nematode C.sp. 31 LS-2015 (JU2585 2019))(info)GCA_900536295.3

•Caenorhabditis sp. 32 LS-2015(nematode C.sp. 32 LS-2015 (JU2788 2019))(info)GCA_900536325.3

•Caenorhabditis sp. 38 MB-2015(nematode C.sp. 38 MB-2015 (JU2809 2019))(info)GCA_900536415.3

•Caenorhabditis sp. 39 LS-2015(nematode C.sp. 39 LS-2015 (NIC564 2019))(info)GCA_900536345.3

•Caenorhabditis sp. 40 LS-2015(nematode C.sp. 40 LS-2015 (JU2818 2019))(info)GCA_900536305.3

•Caenorhabditis tropicalis(nematode C.tropicalis (JU1373 2011))(info)GCA_000186765.1

Mesorhabditinae

Mesorhabditis

•Mesorhabditis belari(nematode M.belari (JU2817 2023))(info)GCA_958450365.1

•Mesorhabditis spiculigera(nematode M.spiculigera (AF72 2023))(info)GCA_958295435.1

Rhabditinae

Oscheius

Oscheius tipulae

•Oscheius tipulae(nematode O.tipulae (2017))(info)GCA_900184235.1

•Oscheius tipulae(nematode O.tipulae (CEW1 2020))(info)GCA_013425905.1

•Allodiplogaster sudhausi(nematode A.sudhausi (2024))(info)GCA_945643635.2

Parapristionchus

•Parapristionchus giblindavisi(nematode P.giblindavisi (2022))(info)GCA_943737045.1

Neodiplogasteridae

Koerneria

•Koerneria luziae(nematode K.luziae (NKZ323 2020))(info)GCA_014805365.1

Pristionchus

•Pristionchus arcanus(nematode P.arcanus (2018))(info)GCA_900490705.1

•Pristionchus exspectatus(nematode P.exspectatus (2022))(info)GCA_911812115.1

•Pristionchus pacificus(nematode P.pacificus (PS312 2020))(info)GCA_000180635.4

•Steinernema scapterisci(mole cricket nematode (FL 2014))(info)GCA_000757745.1

•Steinernema carpocapsae(nematode S.carpocapsae (ALL 2019))(info)GCA_000757645.3

Steinernema feltiae

•Steinernema feltiae(nematode S.feltiae (NW 2019))(info)GCA_007213375.1

•Steinernema feltiae(nematode S.feltiae (SN 2014))(info)GCA_000757705.1

•Steinernema glaseri(nematode S.glaseri (NC 2014))(info)GCA_000757755.1

•Steinernema hermaphroditum(nematode S.hermaphroditum (PS9179 2023))(info)GCA_030435675.2

•Steinernema monticolum(nematode S.monticolum (2013))(info)GCA_000505645.1

Strongyloididae

Parastrongyloides

•Parastrongyloides trichosuri(nematode P.trichosuri (KNP 2014))(info)GCA_000941615.1

Strongyloides

•Strongyloides papillosus(nematode S.papillosus (LIN 2014))(info)GCA_000936265.1

•Strongyloides ratti(nematode S.ratti (ED321 Heterogonic 2014))(info)GCF_001040885.1

•Strongyloides stercoralis(nematode S.stercoralis (PV001 2023))(info)GCA_029582065.1

Panagrolaimoidea

Panagrolaimidae

Halicephalobus

•Halicephalobus mephisto(nematode H.mephisto (m2B 2019))(info)GCA_009193035.1

unclassified Halicephalobus

•Halicephalobus sp. NKZ332(nematode H.sp. (NKZ332 2019))(info)GCA_009761265.1

Panagrellus

•Panagrellus redivivus(nematode P.redivivus (MT8872 2013))(info)GCA_000341325.1

Panagrolaimus

unclassified Panagrolaimus

•Panagrolaimus sp. JU765(nematode Panagrolaimus (JU765 2019))(info)GCA_901765185.1

•Panagrolaimus sp. PS1159(nematode Panagrolaimus (PS1159 2019))(info)GCA_901765195.1

•Panagrolaimus sp. PS1579(nematode Panagrolaimus (PS1579 2019))(info)GCA_901779485.1

•Aphelenchoides besseyi(nematode A.besseyi (AORJ 2022))(info)GCA_024699835.1

Bursaphelenchus

•Bursaphelenchus okinawaensis(nematode B.okinawaensis (SH1 SH1 2021))(info)GCA_904066225.2

Bursaphelenchus xylophilus

•Bursaphelenchus xylophilus(pine wood nematode (Ka4C1 2021))(info)GCA_904066235.2

•Bursaphelenchus xylophilus(pine wood nematode (Ka4C1 inbred line 2011))(info)GCA_000231135.1

•Bursaphelenchus xylophilus(pine wood nematode (USG12 2020))(info)GCA_010367685.1

Sphaerularioidea

Allantonematidae

Bradynema

•Bradynema listronoti(nematode B.listronoti (AAFC-BrLi-01_J3_LR_R9 2022))(info)GCA_024678965.1

Anguinidae

Anguininae

Ditylenchus

•Ditylenchus destructor(nematode D.destructor (Dd01 2016))(info)GCA_001579705.1

•Ditylenchus dipsaci(nematode D.dipsaci (pooled J2 2019))(info)GCA_004194705.1

•Globodera pallida(nematode G.pallida (D383 2021))(info)GCA_020449905.1

•Globodera pallida(nematode G.pallida (Lindley 2014))(info)GCA_000724045.1

•Globodera pallida(nematode G.pallida (Newton 2022))(info)GCA_023343765.1

Globodera rostochiensis

•Globodera rostochiensis(nematode G.rostochiensis (Ro1 2016))(info)GCA_900079975.1

•Globodera rostochiensis(nematode G.rostochiensis (Ro5 L22 2021))(info)GCA_018350315.1

Heterodera

Heterodera schachtii

•Heterodera schachtii(nematode H.schachtii (Bonn 2022))(info)GCA_023374025.1

•Heterodera schachtii(nematode H.schachtii (IRS 2021))(info)GCA_020449115.1

•Heterodera glycines(soybean cyst nematode (TN10 2021))(info)GCA_004148225.2

Meloidogynidae

Meloidogyninae

Meloidogyne

Meloidogyne incognita group

Meloidogyne arenaria

•Meloidogyne arenaria(nematode M.arenaria (A2-O Okinawa_01 2018))(info)GCA_003133805.1

•Meloidogyne arenaria(nematode M.arenaria (HarA 2018))(info)GCA_003693565.1

•Meloidogyne javanica(root-knot nematode (2017))(info)GCA_900003945.1

•Meloidogyne chitwoodi(nematode M.chitwoodi (Roza 2020))(info)GCA_015183025.1

•Meloidogyne floridensis(nematode M.floridensis (2014))(info)GCA_000751915.1

•Meloidogyne graminicola(nematode M.graminicola (IARI 2022))(info)GCA_002778205.2

•Meloidogyne hapla(northern root-knot nematode M.hapla (VW9 2008))(info)GCA_000172435.1

•Acrobeloides nanus(nematode A.nanus (2018))(info)GCA_900406225.1

unclassified Epsilonema

•Epsilonema sp. ZAB3_2(nematode E.sp. (ZAB3_2 2023))(info)GCA_030247985.1

•Plectus sambesii(nematode P.sambesii (ES601 2017))(info)GCA_002796945.1

•Trichuris trichiura(human whipworm (2014))(info)GCA_000613005.1

•Trichuris muris(nematode T.muris (Edinburgh 2019))(info)GCA_000612645.2

Trichuris suis

•Trichuris suis(pig whipworm (2014))(info)GCA_000797535.1

•Trichuris suis(pig whipworm (DCEP-RM93F 2014))(info)GCA_000701025.1

•Trichuris suis(pig whipworm (DCEP-RM93M 2014))(info)GCA_000701005.1

Trichinellidae

Trichinella

•Trichinella murrelli(nematode T.murrelli (ISS417 2015))(info)GCA_001447425.1

•Trichinella nativa(nematode T.nativa (ISS45 2017))(info)GCA_002148645.1

•Trichinella spiralis(nematode T.spiralis (ISS 195 2011))(info)GCF_000181795.1

•Romanomermis culicivorax(nematode R.culicivorax (2014))(info)GCA_001039655.1

•Soboliphyme baturini(nematode S.baturini (2018))(info)GCA_900618415.1

unclassified Gordionus

•Gordionus sp. m RMFG-2023(horsehair worms (2024))(info)GCF_954871325.1

•Priapulus caudatus(priapulids P.caudatus)(info)GCF_000485595.1

•Pinctada fucata(Akoya pearl oyster (2022))(info)GCA_028142955.1

•Pinctada imbricata(Akoya pearl oyster (pearl oyster-OUG 2017))(info)GCA_002216045.1

•Ylistrum balloti(Ballot's saucer scallop (Yb309-2 2023))(info)GCF_031769215.1

Argopecten

•Argopecten irradians(bay scallop (NY 2024))(info)GCF_041381155.1

Pecten

•Pecten maximus(great scallop (2019))(info)GCF_902652985.1

Mizuhopecten

•Mizuhopecten yessoensis(Yesso scallop)(info)GCF_002113885.1

•Mytilus edulis(bivalve M.edulis (primary hap 2024))(info)GCF_963676685.1

Mytilus californianus

•Mytilus californianus(California mussel (M0D057914Y alternate hap 2022))(info)GCA_021869935.1

•Mytilus californianus(California mussel (M0D057914Y primary hap 2022))(info)GCF_021869535.1

•Mytilus trossulus(common blue mussel (FHL-02 hap1 2024))(info)GCF_036588685.1

Mytilus galloprovincialis

•Mytilus galloprovincialis(Mediterranean mussel (2020))(info)GCA_900618805.1

•Mytilus galloprovincialis(Mediterranean mussel (MGYT20220701 primary hap 2024))(info)GCA_037788925.1

•Mytilus galloprovincialis(Mediterranean mussel (xbMytGall1.hap1.1 2025 genbank))(info)GCA_965363235.1

•Mytilus galloprovincialis(Mediterranean mussel (xbMytGall1.hap1.1 2025 refseq))(info)GCF_965363235.1

•Saccostrea echinata(bivalve S.echinata (Australia AGI-Se365-2 2023))(info)GCF_033153115.1

•Saccostrea cuccullata(small rock oyster (Sc308-1 2023))(info)GCF_032062105.1

Ostrea

Ostrea edulis

•Ostrea edulis(bivalves O.edulis (OE_ROSLIN_2020 2022))(info)GCF_023158985.2

•Ostrea edulis(European flat oyster (primary hap 2022))(info)GCF_947568905.1

Crassostrea

•Crassostrea virginica(eastern oyster)(info)GCF_002022765.2

Magallana

Magallana gigas

•Magallana gigas(Pacific oyster (BGI 05x7-T-G4-1.051 20 2019))(info)GCA_000297895.2

•Magallana gigas(Pacific oyster (primary hap 2023))(info)GCF_963853765.1

•Magallana gigas(Pacific oyster (Roslin 2020))(info)GCF_902806645.1

•Magallana angulata(Portugese oyster (pt1a10 2022))(info)GCF_025612915.1

•Corbicula fluminea(Asian clam (DE_01 2016))(info)GCA_001632725.1

Veneroidea

Veneridae

Ruditapes

•Ruditapes philippinarum(Manila clam (M1 2022))(info)GCF_026571515.1

Mercenaria

Mercenaria mercenaria

•Mercenaria mercenaria(northern quahog (notata 2022))(info)GCF_021730395.1

•Mercenaria mercenaria(northern quahog (YKG-2019 2020))(info)GCF_014805675.1

•Mya arenaria(softshell (MELC-2E11 2022))(info)GCF_026914265.1

Dreissenoidea

Dreissenidae

Dreissena

•Dreissena polymorpha(zebra mussel (Duluth1 2021))(info)GCF_020536995.1

•Cepaea nemoralis(banded wood snail (xgCepNemo3.hap2.1 2024))(info)GCA_964166675.1

Arionoidea

Arionidae

Ariolimax

•Ariolimax columbianus(Pacific banana slug (1044Chap1 2024))(info)GCA_036924085.1

Biomphalaria glabrata

•Biomphalaria glabrata(bloodfluke planorb (primary hap 2022))(info)GCF_947242115.1

•Biomphalaria glabrata(bloodfluke planorb (v2 BB02 2013 refseq))(info)GCF_000457365.2

Physidae

Physella

Physella acuta

•Physella acuta(gastropods P.acuta (Inbredline_101_S28 2023))(info)GCF_028476545.1

•Physella acuta(gastropods P.acuta (Inbredline_101_S28 2023))(info)GCF_028476545.2

Lymnaeidae

Lymnaea

•Lymnaea stagnalis(great pond snail (2016))(info)GCA_900036025.1

•Aplysia californica(California sea hare)(info)GCF_000002075.1

•Conus betulinus(Betula cone snail C.betulinus (CN-2020 2021))(info)GCA_016801955.1

Buccinoidea

Buccinidae

Babylonia

•Babylonia areolata(gastropods B.areolata (BAREFJ2019XMU 2024))(info)GCF_041734735.1

•Littorina saxatilis(gastropods L.saxatilis (snail1 2024))(info)GCF_037325665.1

•Pomacea canaliculata(gastropods P.canaliculata)(info)GCF_003073045.1

•Haliotis cracherodii(black abalone (W230 alternate hap 2022))(info)GCA_022045225.1

•Haliotis cracherodii(black abalone (W230 primary hap 2022 genbank))(info)GCA_022045235.1

•Haliotis cracherodii(black abalone (W230 primary hap 2022 refseq))(info)GCF_022045235.1

•Haliotis rubra(blacklip abalone)(info)GCF_003918875.1

•Haliotis asinina(gastropods H.asinina (JCU_RB_2024 2024))(info)GCF_037392515.1

Haliotis rufescens

•Haliotis rufescens(red abalone (Redab-CP-2226-F 2018 Iowa State U))(info)GCF_003343065.1

•Haliotis rufescens(red abalone (VD_foot alternate hap 2022))(info)GCA_023055495.1

•Haliotis rufescens(red abalone (VD_foot primary hap 2022 UCLA))(info)GCF_023055435.1

•Patella vulgata(common limpet (v2 primary hap 2022))(info)GCF_932274485.2

Lottioidea

Lottiidae

Lottia

•Lottia gigantea(owl limpet)(info)GCF_000327385.1

•Gigantopelta aegis(gastropods G.aegis)(info)GCF_016097555.1

•Octopus bimaculoides(California two-spot octopus (v2 UCB-OBI-ISO-001 male 2022))(info)GCF_001194135.2

•Octopus sinensis(East Asian common octopus)(info)GCF_006345805.1

•Euprymna scolopes(Hawaiian bobtail squid E.scolopes (PROMET0715V01 2019))(info)GCA_004765925.1

•Nautilus pompilius(chambered nautilus (Nautilus ZY-0506 2021))(info)GCA_018389105.1

•Liolophura sinensis(chiton L.japonica (JHLJ2023 2024))(info)GCF_032854445.1

•Taenia asiatica(Asian tapeworm (2018))(info)GCA_900618005.1

•Taenia asiatica(Asian tapeworm (TASYD01 2016))(info)GCA_001693035.2

•Taenia saginata(beef tapeworm (TSAYD01 2016))(info)GCA_001693075.2

•Taenia multiceps(flatworm T.multiceps (Gns01 2018))(info)GCA_001923025.3

•Taenia solium(pork tapeworm (TsM 2016))(info)GCA_001870725.1

Echinococcus

Echinococcus canadensis group

•Echinococcus canadensis(flatworm E.canadensis (2016))(info)GCA_900004735.1

Echinococcus granulosus group

Echinococcus granulosus

•Echinococcus granulosus(flatworm E.granulosus (2013))(info)GCA_000469785.1

•Echinococcus granulosus(flatworm E.granulosus (2014))(info)GCF_000524195.1

•Echinococcus granulosus(flatworm E.granulosus (EgG1s_protoscolex 2022))(info)GCA_021556725.1

•Echinococcus multilocularis(flatworm E.multilocularis (2015))(info)GCA_000469725.3

•Echinococcus oligarthrus(flatworm E.oligarthrus (DaMi1 2019))(info)GCA_900683695.1

Hydatigera

•Hydatigera taeniaeformis(flatworm H.taeniaeformis (2018))(info)GCA_900622495.1

Hymenolepididae

Hymenolepis

•Hymenolepis microstoma(flatworm H.microstoma (2019))(info)GCA_000469805.3

Hymenolepis diminuta

•Hymenolepis diminuta(rat tapeworm (2018))(info)GCA_900618445.1

•Hymenolepis diminuta(rat tapeworm (WMS-il1 laboratory inbred isolate 2019))(info)GCA_902177915.1

Rodentolepis

•Rodentolepis nana(flatworm R.nana (2018))(info)GCA_900617975.1

Mesocestoididae

Mesocestoides

•Mesocestoides corti(flatworm M.corti (2018))(info)GCA_900604375.1

Diphyllobothriidea

Diphyllobothriidae

Dibothriocephalus

•Dibothriocephalus latus(broad fish tapeworm (2018))(info)GCA_900617775.1

Schistocephalus

•Schistocephalus solidus(flatworm S.solidus (NST_G2 2018))(info)GCA_900618435.1

•Opisthorchis felineus(cat liver fluke (AK-0245 2019))(info)GCA_004794785.1

•Opisthorchis viverrini(Southeast Asian liver fluke)(info)GCF_000715545.1

Clonorchis

•Clonorchis sinensis(oriental liver fluke (Cs-k2 2021))(info)GCA_003604175.2

•Atriophallophorus winterbourni(flatworm A.winterbourni (NZ2018 2020))(info)GCA_013407085.1

•Echinostoma caproni(flatworm E.caproni (Egypt 2018))(info)GCA_900618425.1

Fasciolidae

Fasciolopsis

•Fasciolopsis buskii(flatworm F.buski (HT 2019))(info)GCA_008360955.1

Fasciola

Fasciola gigantica

•Fasciola gigantica(flatworm F.gigantica (Basrah-Iraq 2023))(info)GCA_030506585.1

•Fasciola gigantica(flatworm F.gigantica (China_swamp 2021))(info)GCA_018104335.1

•Fasciola gigantica(flatworm F.gigantica (FG1 2023))(info)GCA_034768655.1

•Fasciola gigantica(flatworm F.gigantica (Uganda_cow_1 2019))(info)GCA_006461475.1

Fasciola hepatica

•Fasciola hepatica(liver fluke (2019))(info)GCA_002763495.2

•Fasciola hepatica(liver fluke (2024))(info)GCA_948099385.2

•Fasciola hepatica(liver fluke (Shrewsbury 2018))(info)GCA_900302435.1

Troglotremata

Troglotrematidae

Paragonimus

•Paragonimus heterotremus(flatworm P.heterotremus (LC 2020))(info)GCA_013368495.1

•Paragonimus kellicotti(flatworm P.kellicotti (Missouri 2020))(info)GCA_014220965.1

•Paragonimus skrjabini miyazakii(flatworm P.skrjabini miyazakii (Japan 2020))(info)GCA_014338405.1

Paragonimus westermani

•Paragonimus westermani(flatworm P.westermani (180907_Pwestermani 2020))(info)GCA_015252655.1

•Paragonimus westermani(flatworm P.westermani (IND2009 2019))(info)GCA_008508345.1

•Schistosoma bovis(flatworm S.bovis (TAN1997 2019))(info)GCA_003958945.1

•Schistosoma curassoni(flatworm S.curassoni (Dakar, Senegal 2018))(info)GCA_900618015.1

•Schistosoma haematobium(flatworm S.haematobium (v3 2022))(info)GCF_000699445.3

Schistosoma japonicum

•Schistosoma japonicum(flatworm S.japonicum (Anhui 2009))(info)GCA_000151775.1

•Schistosoma japonicum(flatworm S.japonicum (F4M4 2022))(info)GCA_025215515.1

•Schistosoma japonicum(flatworm S.japonicum (HuSjv2 2019))(info)GCA_006368765.1

•Schistosoma japonicum(flatworm S.japonicum (SjaV3_Hu 2022))(info)GCA_021461655.1

Schistosoma mansoni

•Schistosoma mansoni(flatworm S.mansoni (Puerto Rico 2011 genbank))(info)GCA_000237925.2

•Schistosoma mansoni(flatworm S.mansoni (Puerto Rico 2011 refseq))(info)GCF_000237925.1

•Schistosoma margrebowiei(flatworm S.margrebowiei (2022))(info)GCA_944470205.2

•Gyrodactylus bullatarudis(flatworm G.bullatarudis (Rox2016 2020))(info)GCA_012064415.1

•Gyrodactylus salaris(gyrodactylosis fluke (Lier 2014))(info)GCA_000715275.1

•Protopolystoma xenopodis(flatworm P.xenopodis (2019))(info)GCA_900617795.1

•Macrostomum lignano(flatworm M.lignano (dv1 2015))(info)GCA_001188465.1

•Macrostomum lignano(flatworm M.lignano (DV1 2017))(info)GCA_002269645.1

Schmidtea mediterranea

•Schmidtea mediterranea(freshwater planarian (S2 2017))(info)GCA_002600895.1

•Schmidtea mediterranea(freshwater planarian (S2F2 2007))(info)GCA_000181075.1

•Lingula anatina(brachiopods L.anatina)(info)GCF_001039355.2

•Watersipora subatra(bryozoans W.subatra (primary hap 2023))(info)GCF_963576615.1

•Eisenia fetida(common brandling worm (Indian 2019))(info)GCA_003999395.1

•Helobdella robusta(segmented worms (v2 2012))(info)GCF_000326865.2

•Tubulanus polymorphus(ribbon worms (2024))(info)GCF_964204645.1

•Lineus longissimus(ribbon worms (primary hap 2022))(info)GCF_910592395.1

•Brachionus asplanchnoidis(monogonont rotifer B.asplanchnoidis (OHJ7i3n10 2022))(info)GCA_025491095.1

•Convolutriloba macropyga(red planarian C.macropyga (primary hap 2025))(info)GCF_964194025.1

Symsagittifera

•Symsagittifera roscoffensis(Roscoff worm S.roscoffensis (primary hap 2023))(info)GCF_963678635.1

Hofsteniidae

Hofstenia

•Hofstenia miamia(three-banded panther worm (2019))(info)GCA_900660155.1

•Actinia tenebrosa(Australian red waratah sea anemone)(info)GCF_009602425.1

Anthopleura

Anthopleura sola

•Anthopleura sola(starburst anemone (alt pseudohaplotype CCGP_MDBC_AS_20200803 2022))(info)GCA_023349385.1

•Anthopleura sola(starburst anemone (CCGP_MDBC_AS_20200803 2022))(info)GCA_023349425.1

Aiptasiidae

Exaiptasia

•Exaiptasia diaphana(sea anemones (CC7 2015 refseq))(info)GCF_001417965.1

Edwardsiidae

Nematostella

Nematostella vectensis

•Nematostella vectensis(starlet sea anemone (2022 Wellcome Sanger))(info)GCF_932526225.1

•Nematostella vectensis(starlet sea anemone (CH2 x CH6 2007 JGI))(info)GCF_000209225.1

Pocillopora verrucosa

•Pocillopora verrucosa(cauliflower coral (Pver-AG016-CSIRO1 2023))(info)GCF_030620025.1

•Pocillopora verrucosa(stony corals (sample1 2024))(info)GCF_036669915.1

•Pocillopora damicornis(stony coral P.damicornis)(info)GCF_003704095.1

Stylophora

•Stylophora pistillata(stony coral S.pistillata (v1.1 CSM Monaco 2017))(info)GCF_002571385.2

Acroporidae

Acropora

•Acropora palmata(elkhorn coral (primary hap 2025))(info)GCF_964030605.1

•Acropora digitifera(stony coral A.digitifera)(info)GCF_000222465.1

Acropora millepora

•Acropora millepora(stony coral A.millepora (JS-1 2020))(info)GCF_013753865.1

•Acropora millepora(stony coral A.millepora (SF001 2019))(info)GCF_004143615.1

•Acropora muricata(stony coral A.muricata (sample 2 2024))(info)GCF_036669905.1

Montipora

•Montipora capitata(stony coral M.capitata (primary hap 2023))(info)GCA_949126865.1

•Montipora capricornis(stony coral M.capricornis (CH-2021 2024))(info)GCF_036669925.1

•Montipora foliosa(stony coral M.foliosa (CH-2021 2024))(info)GCF_036669935.1

Faviina

Merulinidae

Orbicella

•Orbicella faveolata(stony coral O.faveolata)(info)GCF_002042975.1

Fungiina

Poritidae

Porites

•Porites cylindrica(stony coral P.cylindrica (primary hap 2024))(info)GCA_964035525.1

•Porites lutea(stony coral P.lutea (primary hap 2023))(info)GCF_958299795.1

•Dendronephthya gigantea(soft corals D.gigantea (DGI-Jeju-01 2019))(info)GCF_004324835.1

Xeniidae

Xenia

unclassified Xenia

•Xenia sp. Carnegie-2017(soft corals Xenia (Carnegie-2017 2022))(info)GCF_021976095.1

•Hydractinia symbiolongicarpus(H.symbiolongicarpus hydrozoans (clone_291-10 2023))(info)GCF_029227915.1

•Hydra vulgaris(hydrozoans H.vulgaris)(info)GCF_000004095.1

•Hydra vulgaris(swiftwater hydra (105 2022))(info)GCF_022113875.1

•Hydra vulgaris(swiftwater hydra (T2T-105 2024))(info)GCF_037890685.1

•Hydra vulgaris(swiftwater hydra (T2T-AEP 2024))(info)GCF_038396675.1

•Clytia hemisphaerica(hydrozoans C.hemisphaerica (Z4C2 2020))(info)GCF_902728285.1

•Rhopilema esculentum(jellyfish R.esculentum (edhc-2017 2020))(info)GCF_013076305.1

•Kudoa neothunni(myxozoans (alternate hap 2024))(info)GCA_964304655.1

•Kudoa neothunni(myxozoans (primary hap 2024))(info)GCA_964304625.1

Kudoa iwatai

•Kudoa iwatai(myxozoans (KIW-1.11.2010 2015))(info)GCA_001407335.1

•Kudoa iwatai(myxozoans (KIW-1.11.2010 2017))(info)GCA_001407235.2

•Bolinopsis microptera(comb jelly B.microptera (Bmic1 2022))(info)GCF_026151205.1

Mnemiopsis

•Mnemiopsis leidyi(sea walnut (SFBML 2025))(info)GCA_048537945.1

Cydippida

Pleurobrachiidae

Pleurobrachia

•Pleurobrachia bachei(ctenophores P.bachei (2014))(info)GCA_000695325.1

•Beroe forskalii(ctenophores B.forskalii (Bf201606 2020))(info)GCA_011033025.1

•Trichoplax adhaerens(placozoans T.adhaerens (Grell-BS-1999 2008))(info)GCF_000150275.1

unclassified Trichoplax

•Trichoplax sp. H2(placozoans Trichoplax sp. H2 (Panama 2018))(info)GCA_003344405.1

•Ephydatia muelleri(Mueller's freshwater sponge E.muelleri (2020))(info)GCA_013339895.1

Haplosclerida

Niphatidae

Amphimedon

•Amphimedon queenslandica(sponge A.queenslandica (v1.1 JGI-PGF 2010))(info)GCF_000090795.2

Suberitida

Halichondriidae

Halichondria

•Halichondria panicea(sponge H.panicea (primary hap 2023))(info)GCF_963675165.1

{1937956}

•Halichondria

•Dysidea avara(sponge D.avara (primary hap 2024))(info)GCF_963678975.1

•Corticium candelabrum(sponge C.candelabrum (2023))(info)GCF_963422355.1

Oscarellidae

Oscarella

•Oscarella lobularis(sponge O.lobularis (primary hap 2022))(info)GCF_947507565.1

•Sycon ciliatum(sponge S.ciliatum (primary hap 2024))(info)GCF_964019385.1

Ichthyosporea

Ichthyophonida

Creolimax

•Creolimax fragrantissima(C.fragrantissima (CCCM101 2017))(info)GCA_002024145.1

Sphaeroforma

•Sphaeroforma arctica(S.arctica (3-2015 2019))(info)GCA_008580545.1

unclassified Ichthyosporea

•Ichthyosporea sp. XGB-2017a(Ichthyosporea XGB-2017a (Hawaii 2017))(info)GCA_002811675.1

Opisthokonta incertae sedis

Corallochytrium

•Corallochytrium limacisporum(C.limacisporum (Hawaii 2017))(info)GCA_002811645.1

•Angomonas deanei(Angomonas (Crithidia deanei Carvalho ATCC PRA-265 2020))(info)GCA_903995115.1

Blastocrithidia

•Blastocrithidia nonstop(Blastocrithidia sp. (p57 2023))(info)GCA_028554745.1

Blechomonas

•Blechomonas ayalai(Blechomonas ayalai (B08-376 2021))(info)GCA_020509355.1

Leishmaniinae

Crithidia

•Crithidia fasciculata(Crithidia fasciculata (Cf-Cl 2015))(info)GCA_000331325.2

Endotrypanum

•Endotrypanum monterogeii(Endotrypanum monterogeii (LV88 2016))(info)GCA_000333855.2

Leishmania

Leishmania aethiopica species complex

Leishmania aethiopica

•Leishmania aethiopica L147(Leishmania aethiopica (L147 2016))(info)GCA_000444285.2

Leishmania mexicana species complex

Leishmania amazonensis

•Leishmania amazonensis(Leishmania amazonensis (2013))(info)GCA_000438535.1

•Leishmania amazonensis(Leishmania amazonensis (PH8 2022))(info)GCA_025688915.1

Leishmania mexicana

•Leishmania mexicana MHOM/GT/2001/U1103(Leishmania mexicana (MHOM/GT/2001/U1103 2011 kinetoplastids))(info)GCF_000234665.1

Leishmania donovani species complex

Leishmania donovani

•Leishmania donovani(Leishmania donovani (2020))(info)GCA_900635355.2

•Leishmania donovani(Leishmania donovani (BHU 1220 2013))(info)GCA_000470725.1

•Leishmania donovani(Leishmania donovani (BPK282A1 2011 kinetoplastids))(info)GCF_000227135.1

•Leishmania donovani(Leishmania donovani (LdCL 2018))(info)GCA_003719575.1

Leishmania infantum

•Leishmania infantum(Leishmania infantum (2020))(info)GCA_900500625.2

•Leishmania infantum JPCM5(Leishmania infantum (JPCM5 2011 kinetoplastids refseq))(info)GCF_000002875.2

Leishmania major species complex

Leishmania major

Leishmania major strain Friedlin

•Leishmania major strain Friedlin(Leishmania major (Friedlin 2011 kinetoplastids refseq))(info)GCF_000002725.2

•Leishmania major strain Friedlin(Leishmania major strain (Friedlin 2021))(info)GCA_916722125.1

•Leishmania major strain LV39c5(Leishmania major strain (LV39c5 2013))(info)GCA_000331345.1

•Leishmania major strain SD 75.1(Leishmania major strain (SD 75.1 2012))(info)GCA_000250755.2

•Leishmania martiniquensis(Leishmania martiniquensis (LSCM1 2021 refseq))(info)GCF_017916325.1

Leishmania tropica species complex

Leishmania tropica

•Leishmania tropica L590(Leishmania tropica (L590 2013))(info)GCA_000410715.1

•Leishmania arabica(Leishmania arabica (LEM1108 2016))(info)GCA_000410695.2

Viannia

Leishmania braziliensis species complex

Leishmania braziliensis

•Leishmania braziliensis MHOM/BR/75/M2903(Leishmania braziliensis (MHOM/BR/75/M2903 2016 kinetoplastids))(info)GCA_000340355.2

•Leishmania braziliensis MHOM/BR/75/M2904(Leishmania braziliensis (MHOM/BR/75/M2904 2011 kinetoplastids))(info)GCF_000002845.2

Leishmania guyanensis species complex

Leishmania panamensis

•Leishmania panamensis(Leishmania panamensis (MHOM/PA/94/PSC-1 2014 kinetoplastids))(info)GCF_000755165.1

•Leishmania panamensis MHOM/COL/81/L13(Leishmania panamensis (MHOM/COL/81/L13 2013))(info)GCA_000340495.1

Mundinia

Leishmania enriettii

•Leishmania enriettii(Leishmania enriettii (CUR178 2021 genbank))(info)GCA_017916305.1

•Leishmania enriettii(Leishmania enriettii (CUR178 2021 refseq))(info)GCF_017916305.1

•Leishmania enriettii(Leishmania enriettii (LEM3045 2016))(info)GCA_000410755.2

•Leishmania orientalis(Leishmania orientalis (LSCM4 2021 refseq))(info)GCF_017916335.1

unclassified Mundinia

Leishmania sp. Ghana 2012 LV757

•Leishmania sp. Ghana 2012 LV757(Leishmania sp. Ghana 2012 LV757 (GH5 2021 genbank))(info)GCA_017918215.1

•Leishmania sp. Ghana 2012 LV757(Leishmania sp. Ghana 2012 LV757 (GH5 2021 refseq))(info)GCF_017918215.1

Leishmania sp. Namibia

•Leishmania sp. Namibia(Leishmania sp. Namibia (253 2021 genbank))(info)GCA_017918225.1

•Leishmania sp. Namibia(Leishmania sp. Namibia (253 2021 refseq))(info)GCF_017918225.1

•Leishmania gerbilli(Leishmania gerbilli (LEM452 2013))(info)GCA_000443025.1

unclassified Leishmania

•Leishmania sp. MAR LEM2494(Leishmania sp. MAR (LEM2494 2016))(info)GCA_000409445.2

lizard Leishmania

Leishmania tarentolae

•Leishmania tarentolae(Leishmania tarentolae (Parrot Tar II 2019))(info)GCA_009731335.1

•Leishmania tarentolae(Leishmania tarentolae (Parrot-TarII 2019))(info)GCA_009770625.1

•Leishmania turanica(Leishmania turanica (LEM423 2013))(info)GCA_000441995.1

Leptomonas

•Leptomonas pyrrhocoris(Leptomonas pyrrhocoris (H10 2015 kinetoplastids))(info)GCF_001293395.1

•Leptomonas seymouri(Leptomonas seymouri (ATCC 30220 2015))(info)GCA_001299535.1

Porcisia

•Porcisia hertigi(Porcisia hertigi (C119 2021 refseq))(info)GCF_017918235.1

Paratrypanosoma

•Paratrypanosoma confusum(Paratrypanosoma confusum (CUL13MS 2018))(info)GCA_002921335.1

Trypanosoma

Trypanozoon

Trypanosoma brucei

•Trypanosoma brucei(Trypanosoma brucei (EATRO1125 2021))(info)GCA_019096175.1

Trypanosoma brucei brucei

•Trypanosoma brucei brucei(Trypanosoma brucei brucei (2018))(info)GCA_900497135.1

•Trypanosoma brucei brucei TREU927(Trypanosoma brucei brucei (927/4 GUTat10.1 2005 kinetoplastids))(info)GCF_000002445.2

Trypanosoma brucei gambiense

•Trypanosoma brucei gambiense DAL972(Trypanosoma brucei gambiense (Dal972 MHOM/CI/86/DAL972 2009 kinetoplastids))(info)GCF_000210295.1

•Trypanosoma equiperdum(Trypanosoma equiperdum (OVI 2016 refseq))(info)GCF_001457755.1

•Trypanosoma evansi(Trypanosoma evansi (2021))(info)GCA_917563935.1

Nannomonas

Trypanosoma congolense

•Trypanosoma congolense(Trypanosoma congolense (Tc1/148 2017))(info)GCA_002287245.1

Trypanosoma congolense IL3000

•Trypanosoma congolense IL3000(Trypanosoma congolense (IL3000 2011))(info)GCA_000227395.2

•Trypanosoma congolense IL3000(Trypanosoma congolense (IL3000 2018 kinetoplastids))(info)GCA_003013265.1

Trypanosoma with unspecified subgenus

•Trypanosoma conorhini(Trypanosoma conorhini (025E 2018 kinetoplastids))(info)GCF_003719485.1

•Trypanosoma grayi(Trypanosoma grayi (ANR4 2014 kinetoplastids))(info)GCF_000691245.1

•Trypanosoma theileri(Trypanosoma theileri (Edinburgh 2017 kinetoplastids))(info)GCF_002087225.1

Schizotrypanum

Trypanosoma cruzi

•Trypanosoma cruzi(Trypanosoma cruzi (231 2018))(info)GCA_900252365.1

•Trypanosoma cruzi(Trypanosoma cruzi (Berenice 2020))(info)GCA_013358655.1

•Trypanosoma cruzi(Trypanosoma cruzi (Brazil clone A4 2020))(info)GCA_015033625.1

•Trypanosoma cruzi(Trypanosoma cruzi (Bug2148 2017))(info)GCA_002749415.1

•Trypanosoma cruzi(Trypanosoma cruzi (CL 2018))(info)GCA_003719155.1

•Trypanosoma cruzi(Trypanosoma cruzi (CL Brener 2005 kinetoplastids))(info)GCF_000209065.1

•Trypanosoma cruzi(Trypanosoma cruzi (Dm28c 2018))(info)GCA_003177105.1

•Trypanosoma cruzi(Trypanosoma cruzi (G 2018))(info)GCA_003719455.1

•Trypanosoma cruzi(Trypanosoma cruzi (S11 2018))(info)GCA_003594385.1

•Trypanosoma cruzi(Trypanosoma cruzi (S15 2018))(info)GCA_003594585.1

•Trypanosoma cruzi(Trypanosoma cruzi (S154a 2018))(info)GCA_003594715.1

•Trypanosoma cruzi(Trypanosoma cruzi (S162a 2018))(info)GCA_003594605.1

•Trypanosoma cruzi(Trypanosoma cruzi (S23b 2018))(info)GCA_003594425.1

•Trypanosoma cruzi(Trypanosoma cruzi (S44a 2018))(info)GCA_003594705.1

•Trypanosoma cruzi(Trypanosoma cruzi (S92a 2018))(info)GCA_003594445.1

•Trypanosoma cruzi(Trypanosoma cruzi (Sylvio X10/1 2012))(info)GCA_000188675.2

•Trypanosoma cruzi(Trypanosoma cruzi (TCC 2018))(info)GCA_003177095.1

•Trypanosoma cruzi(Trypanosoma cruzi (Y 2017))(info)GCA_002749425.1

•Trypanosoma cruzi(Trypanosoma cruzi (Y clone C6 2020))(info)GCA_015033655.1

•Trypanosoma cruzi(Trypanosoma cruzi (Ycl2 2018))(info)GCA_003594485.1

•Trypanosoma cruzi(Trypanosoma cruzi (Ycl4 2018))(info)GCA_003594405.1

•Trypanosoma cruzi(Trypanosoma cruzi (Ycl6 2018))(info)GCA_003594465.1

•Trypanosoma cruzi Dm28c(Trypanosoma cruzi (Dm28c 2013))(info)GCA_000496795.1

•Trypanosoma cruzi JR cl. 4(Trypanosoma cruzi (JR cl. 4 2013))(info)GCA_000331405.1

•Trypanosoma cruzi Tula cl2(Trypanosoma cruzi (Tula cl2 2013))(info)GCA_000365225.1

•Trypanosoma cruzi cruzi(Trypanosoma cruzi cruzi (Dm28c 2017))(info)GCA_002219105.2

•Trypanosoma cruzi marinkellei(Trypanosoma cruzi marinkellei (B7 2012))(info)GCA_000300495.1

•Trypanosoma cruzi strain Esmeraldo(Trypanosoma cruzi strain (Esmeraldo cl. 3 2013))(info)GCA_000327425.1

Megatrypanum

•Trypanosoma melophagium(Trypanosoma melophagium (St. Kilda St. Kilda 2022 refseq))(info)GCF_022059095.1

Herpetosoma

Trypanosoma rangeli

•Trypanosoma rangeli(Trypanosoma rangeli (AM80 2018 kinetoplastids))(info)GCF_003719475.1

•Trypanosoma rangeli SC58(Trypanosoma rangeli (SC58 2013))(info)GCA_000492115.1

Duttonella

Trypanosoma vivax

•Trypanosoma vivax Y486(Trypanosoma vivax (Y486 2011))(info)GCA_000227375.1

Eubodonida

Bodonidae

Bodo

•Bodo saltans(Bodo saltans (Lake Konstanz 2015))(info)GCA_001460835.1

•Naegleria fowleri(brain-eating amoeba (AR12 2023))(info)GCA_027563075.1

•Naegleria fowleri(brain-eating amoeba (ATCC 30863 2013))(info)GCA_000499105.1

•Naegleria fowleri(brain-eating amoeba (ATCC 30894 2019 genbank))(info)GCA_008403515.1

•Naegleria fowleri(brain-eating amoeba (ATCC 30894 2019 refseq))(info)GCF_008403515.1

•Naegleria fowleri(brain-eating amoeba (kurume 2021))(info)GCA_020891285.1

•Naegleria fowleri(brain-eating amoeba (NF1 2023))(info)GCA_027563095.1

•Naegleria fowleri(brain-eating amoeba (NF_KFSHRC_1 2020))(info)GCA_902703645.1

•Naegleria fowleri(brain-eating amoeba (PA34 2023))(info)GCA_027563055.1

•Naegleria fowleri(brain-eating amoeba (Ty 2020))(info)GCA_014843625.1

Naegleria gruberi

•Naegleria gruberi(N.gruberi (NEG-M 2010 genbank))(info)GCA_000004985.1

•Naegleria gruberi(N.gruberi (NEG-M 2010 refseq))(info)GCF_000004985.1

Naegleria lovaniensis

•Naegleria lovaniensis(N.lovaniensis (ATCC 30569 2021 genbank))(info)GCA_003324165.2

•Naegleria lovaniensis(N.lovaniensis (ATCC 30569 2021 refseq))(info)GCF_003324165.1

•Naegleria lovaniensis(N.lovaniensis (F9 2023))(info)GCA_027562995.1

•Naegleria lovaniensis(N.lovaniensis (Lova6 2023))(info)GCA_027563035.1

•Naegleria lovaniensis(N.lovaniensis (Lova7 2023))(info)GCA_027563015.1

•Naegleria lovaniensis(N.lovaniensis (NL_76_15_250 2022))(info)GCA_022530875.1

Willaertia

•Willaertia magna(Willaertia magna (c2c maky 2024))(info)GCA_041937235.1

Neovahlkampfiidae

Neovahlkampfia

•Neovahlkampfia damariscottae(Neovahlkampfia damariscottae (CCAP 1588/7 2021))(info)GCA_016618085.1

•Besnoitia besnoiti(apicomplexans B.besnoiti (Bb-Ger1 2017))(info)GCF_002563875.1

Cystoisospora

Cystoisospora suis

•Cystoisospora suis(apicomplexans C.suis (Wien I 2017 genbank))(info)GCA_002600585.1

•Cystoisospora suis(apicomplexans C.suis (Wien I 2017 refseq))(info)GCF_002600585.1

Hammondia

•Hammondia hammondi(apicomplexans H.hammondi (H.H.34 2014))(info)GCF_000258005.1

Neospora

Neospora caninum

•Neospora caninum(apicomplexans N.caninum (Liverpool 2020))(info)GCA_016097395.1

•Neospora caninum Liverpool(apicomplexans N.caninum (Liverpool 2011))(info)GCF_000208865.1

Sarcocystis

Sarcocystis neurona

•Sarcocystis neurona(apicomplexans S.neurona (SN1 2015))(info)GCA_000875885.1

•Sarcocystis neurona(apicomplexans S.neurona (SN3 2014))(info)GCA_000727475.1

Toxoplasma

Toxoplasma gondii

•Toxoplasma gondii(apicomplexans T.gondii (ME49 B7 2021))(info)GCA_019455585.1

•Toxoplasma gondii(apicomplexans T.gondii (ME49xCTG S27 2020))(info)GCA_014898695.1

•Toxoplasma gondii(apicomplexans T.gondii (RH-88 2020))(info)GCA_013099955.1

•Toxoplasma gondii ARI(apicomplexans T.gondii (ARI 2016))(info)GCA_000250965.2

•Toxoplasma gondii CAST(apicomplexans T.gondii (CAST 2018))(info)GCA_000256705.2

•Toxoplasma gondii COUG(apicomplexans T.gondii (COUG 2017))(info)GCA_000338675.2

•Toxoplasma gondii CtCo5(apicomplexans T.gondii (CtCo5 2012))(info)GCA_000278365.1

•Toxoplasma gondii FOU(apicomplexans T.gondii (FOU 2014))(info)GCA_000224905.2

•Toxoplasma gondii GAB2-2007-GAL-DOM2(apicomplexans T.gondii (GAB2-2007-GAL-DOM2 2014))(info)GCA_000325525.2

•Toxoplasma gondii GT1(apicomplexans T.gondii (GT1 2013))(info)GCA_000149715.2

•Toxoplasma gondii MAS(apicomplexans T.gondii (MAS 2014))(info)GCA_000224865.2

•Toxoplasma gondii p89(apicomplexans T.gondii (p89 2014))(info)GCA_000224885.2

•Toxoplasma gondii RH(apicomplexans T.gondii (RH 2016))(info)GCA_001593265.1

•Toxoplasma gondii RUB(apicomplexans T.gondii (RUB 2014))(info)GCA_000224805.2

•Toxoplasma gondii TgCATBr5(apicomplexans T.gondii (TgCATBr5 2011))(info)GCA_000259835.1

•Toxoplasma gondii TgCATBr9(apicomplexans T.gondii (TgCATBr9 2018))(info)GCA_000224825.2

•Toxoplasma gondii TgCatPRC2(apicomplexans T.gondii (TgCatPRC2 2016))(info)GCA_000256725.2

•Toxoplasma gondii VAND(apicomplexans T.gondii (VAND 2014))(info)GCA_000224845.2

Toxoplasma gondii type III

•Toxoplasma gondii VEG(apicomplexans T.gondii (VEG 2013))(info)GCA_000150015.2

•Toxoplasma gondii ME49(Toxoplasma gondii (ME49 2013))(info)GCF_000006565.2

Cryptosporidiidae

Cryptosporidium

•Cryptosporidium andersoni(apicomplexans C.andersoni (30847 2016))(info)GCF_001865355.1

•Cryptosporidium baileyi(apicomplexans C.baileyi (TAMU-09Q1 2016))(info)GCA_001593455.1

•Cryptosporidium bovis(apicomplexans C.bovis (45015 2021))(info)GCF_009768925.1

Cryptosporidium hominis

•Cryptosporidium hominis(apicomplexans C.hominis (2015))(info)GCA_002223825.1

•Cryptosporidium hominis(apicomplexans C.hominis (30976 2015))(info)GCA_001483515.1

•Cryptosporidium hominis(apicomplexans C.hominis (37999 2014))(info)GCA_000804495.1

•Cryptosporidium hominis(apicomplexans C.hominis (TU502_2012 2016))(info)GCA_001593465.1

•Cryptosporidium hominis(apicomplexans C.hominis (UKH1 2016))(info)GCA_001593475.1

Cryptosporidium hominis TU502

•Cryptosporidium hominis TU502(apicomplexans C.hominis (TU502 2004 refseq))(info)GCF_000006425.1

•Cryptosporidium hominis TU502(apicomplexans C.hominis (TU502 2013 genbank))(info)GCA_000006425.2

•Cryptosporidium meleagridis(apicomplexans C.meleagridis (UKMEL1 2016))(info)GCA_001593445.1

Cryptosporidium muris

•Cryptosporidium muris RN66(apicomplexans C.muris (RN66 2008))(info)GCF_000006515.1

Cryptosporidium parvum

•Cryptosporidium parvum(apicomplexans C.parvum (2021))(info)GCA_019844115.2

•Cryptosporidium parvum(apicomplexans C.parvum (IOWA-ATCC 2020))(info)GCA_015245375.1

•Cryptosporidium parvum Iowa II(apicomplexans C.parvum (Iowa type II 2007))(info)GCF_000165345.1

•Cryptosporidium ryanae(apicomplexans C.ryanae (45019 2022))(info)GCF_009792415.1

unclassified Cryptosporidium

•Cryptosporidium sp. chipmunk LX-2015(apicomplexans C.sp. (chipmunk LX-2015 2015))(info)GCA_000831705.1

Cryptosporidium genotype names

•Cryptosporidium sp. chipmunk genotype I(apicomplexans C.sp. chipmunk genotype I (37763 2021 refseq))(info)GCF_004936735.1

•Cryptosporidium tyzzeri(apicomplexans C.tyzzeri (UGA55 2019))(info)GCA_007210665.1

•Cryptosporidium ubiquitum(apicomplexans C.ubiquitum (39726 2016))(info)GCF_001865345.1

Eimeriidae

Cyclospora

Cyclospora cayetanensis

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCDC004_96 2018))(info)GCA_003945175.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCGM002_97 2018))(info)GCA_003945135.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCGM012_97 2018))(info)GCA_003945085.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCJK011_15 2018))(info)GCA_003945075.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCJK015_15 2018))(info)GCA_003945155.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCMX010_16 2018))(info)GCA_003945065.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCNE181_16 2018))(info)GCA_003945055.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCNP016_97 2018))(info)GCA_003945145.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCTX365_13 2018))(info)GCA_003945045.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCTX460_16 2018))(info)GCA_003944945.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCTX495_16 2018))(info)GCA_003944975.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCTX503_16 2018))(info)GCA_003944985.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCTX535_14 2018))(info)GCA_003944965.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC HCTX547_15 2018))(info)GCA_003944955.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCFL47:13 2018))(info)GCA_002893405.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCGM01:97 2017))(info)GCA_002019465.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCGM11:97 2018))(info)GCA_002893445.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCJK01:14 2017))(info)GCA_002019475.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCNY16:01 2018))(info)GCA_002893425.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCRI01:97 2017))(info)GCA_002019905.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCTX204:15 2018))(info)GCA_002893365.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCTX205:15 2018))(info)GCA_003057635.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCTX227:15 2018))(info)GCA_002893465.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCTX230:15 2018))(info)GCA_002893315.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCTX48:14 2018))(info)GCA_002893485.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCTX69:14 2017))(info)GCA_002019455.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CDC:HCVA02:15 2018))(info)GCA_002893375.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CHN_HEN01 2016 genbank))(info)GCA_000769155.2

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CHN_HEN01 2016 refseq))(info)GCF_000769155.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (CHN_HEN01 2018))(info)GCA_002893305.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (Mex32 2024))(info)GCA_038051855.1

•Cyclospora cayetanensis(apicomplexans C.cayetanensis (NF1_C8 2018))(info)GCF_002999335.1

Eimeria

•Eimeria acervulina(apicomplexans E.acervulina (Houghton 2013))(info)GCF_000499425.1

•Eimeria brunetti(apicomplexans E.brunetti (Houghton 2013))(info)GCA_000499725.1

•Eimeria falciformis(apicomplexans E.falciformis (Bayer Haberkorn 1970 2017))(info)GCA_002271815.1

•Eimeria maxima(apicomplexans E.maxima (Weybridge 2013))(info)GCF_000499605.1

•Eimeria mitis(apicomplexans E.mitis (Houghton 2013))(info)GCF_000499745.2

•Eimeria necatrix(apicomplexans E.necatrix (Houghton 2013))(info)GCF_000499385.1

•Eimeria praecox(apicomplexans E.praecox (Houghton 2013))(info)GCA_000499445.1

Eimeria tenella

•Eimeria tenella(apicomplexans E.tenella (2021))(info)GCA_905310635.1

•Eimeria tenella(apicomplexans E.tenella (v1 Houghton 2013))(info)GCF_000499545.1

•Eimeria tenella(apicomplexans E.tenella (v2 Houghton 2013))(info)GCF_000499545.2

•Gregarina niphandrodes(apicomplexans G.niphandrodes (2014))(info)GCF_000223845.1

Porosporidae

Porospora

•Porospora cf. gigantea A(apicomplexans P.cf. gigantea (A 2021))(info)GCF_019968955.1

Porospora cf. gigantea B

•Porospora cf. gigantea B(apicomplexans P.cf. gigantea (B 2021 genbank))(info)GCA_019968985.2

•Porospora cf. gigantea B(apicomplexans P.cf. gigantea (B 2021 refseq))(info)GCF_019968985.1

•Babesia bigemina(apicomplexans B.bigemina (BOND 2014))(info)GCA_000723445.1

•Babesia bigemina(apicomplexans B.bigemina (Bond 2014))(info)GCF_000981445.1

Babesia bovis

•Babesia bovis T2Bo(apicomplexans B.bovis (T2Bo 2021))(info)GCF_000165395.2

•Babesia caballi(apicomplexans B.caballi (USDA-D6B2 2022))(info)GCF_024862765.1

Babesia divergens

•Babesia divergens(apicomplexans B.divergens (1802A 2021))(info)GCA_018398725.1

•Babesia divergens(apicomplexans B.divergens (Rouen 1987 2018))(info)GCA_001077455.2

Babesia duncani

•Babesia duncani(apicomplexans B.duncani (WA1 2022))(info)GCA_024586265.1

•Babesia duncani(apicomplexans B.duncani (WA1 2023))(info)GCF_028658345.1

Babesia microti

•Babesia microti(apicomplexans B.microti (ATCC 30222 2016))(info)GCA_001650055.1

•Babesia microti(apicomplexans B.microti (ATCC PRA-99 2016))(info)GCA_001650065.1

•Babesia microti(apicomplexans B.microti (GI 2016))(info)GCA_001650105.1

•Babesia microti(apicomplexans B.microti (GreenwichYale_Lab_strain_1 2016))(info)GCA_001650075.1

•Babesia microti(apicomplexans B.microti (Nan_Hs_2011_N11-50 2016))(info)GCA_001650145.1

•Babesia microti(apicomplexans B.microti (Naushon 2016))(info)GCA_001650135.1

•Babesia microti strain RI(apicomplexans B.microti strain (RI 2015))(info)GCF_000691945.2

•Babesia ovata(apicomplexans B.ovata (Miyake 2017))(info)GCF_002897235.1

•Babesia ovis(apicomplexans B.ovis (Selcuk 2022))(info)GCA_023705535.2

unclassified Babesia

•Babesia sp. Xinjiang(apicomplexans B.sp. (Xinjiang 2017))(info)GCF_002095265.1

Theileriidae

Cytauxzoon

•Cytauxzoon felis(apicomplexans C.felis (Winnie 2021))(info)GCA_020283715.1

Theileria

Theileria annulata

•Theileria annulata(apicomplexans T.annulata (v1 Ankara isolate clone C9 2005))(info)GCA_000003225.1

•Theileria annulata(apicomplexans T.annulata (v2 Ankara isolate clone C9 2005))(info)GCF_000003225.2

•Theileria annulata(apicomplexans T.annulata (v4 Ankara isolate clone C9 2005))(info)GCF_000003225.4

Theileria equi

•Theileria equi strain WA(apicomplexans T.equi strain (WA 2012))(info)GCF_000342415.1

Theileria orientalis

•Theileria orientalis(apicomplexans T.orientalis (Fish Creek 2022))(info)GCA_003072545.4

•Theileria orientalis(apicomplexans T.orientalis (Goon Nure 2022))(info)GCA_003072535.4

•Theileria orientalis strain Shintoku(apicomplexans T.orientalis strain (Shintoku 2012))(info)GCF_000740895.1

Theileria parva

•Theileria parva strain Muguga(apicomplexans T.parva strain (Muguga 2005))(info)GCF_000165365.1

Haemosporida

Plasmodiidae

Hepatocystis

unclassified Hepatocystis

•Hepatocystis sp. ex Piliocolobus tephrosceles(apicomplexans H.sp. ex Piliocolobus tephrosceles (2020))(info)GCA_902459845.2

Plasmodium

Plasmodium berghei

•Plasmodium berghei ANKA(apicomplexans P.berghei (ANKA 2019))(info)GCF_900002375.2

Plasmodium chabaudi

•Plasmodium chabaudi chabaudi(apicomplexans P.chabaudi chabaudi (AS 2019))(info)GCF_900002335.3

Plasmodium vinckei

•Plasmodium vinckei(apicomplexans P.vinckei (2020))(info)GCA_903994265.1

Plasmodium vinckei vinckei

•Plasmodium vinckei vinckei(apicomplexans P.vinckei (vinckei 2014))(info)GCF_000709005.1

•Plasmodium vinckei vinckei(apicomplexans P.vinckei vinckei (2019))(info)GCF_900681995.1

•Plasmodium vinckei brucechwatti(apicomplexans P.vinckei brucechwatti (2020))(info)GCA_903994205.1

•Plasmodium vinckei lentum(apicomplexans P.vinckei lentum (2020))(info)GCA_903994225.1

Plasmodium vinckei petteri

•Plasmodium vinckei petteri(apicomplexans P.vinckei petteri (2020))(info)GCA_903994235.1

•Plasmodium vinckei petteri(apicomplexans P.vinckei petteri (CR 2014))(info)GCA_000524515.1

Plasmodium yoelii

•Plasmodium yoelii(apicomplexans P.yoelii (17X 2019))(info)GCF_900002385.2

•Plasmodium yoelii(apicomplexans P.yoelii (YM 2014))(info)GCA_900002395.1

Plasmodium yoelii yoelii

•Plasmodium yoelii yoelii(apicomplexans P.yoelii yoelii (17XNL clone 1.1 2023))(info)GCA_020844765.3

•Plasmodium yoelii yoelii 17XNL(apicomplexans P.yoelii yoelii (17XNL 2002))(info)GCF_000003085.2

{418101}

•Vinckeia

Plasmodium

•Plasmodium brasilianum(apicomplexans P.brasilianum (Bolivian I 2022))(info)GCF_023973825.1

Plasmodium cynomolgi

•Plasmodium cynomolgi(apicomplexans P.cynomolgi (M 2017))(info)GCA_900180395.1

•Plasmodium cynomolgi strain B(apicomplexans P.cynomolgi strain (B 2012))(info)GCF_000321355.1

•Plasmodium fragile(apicomplexans P.fragile (nilgiri 2015))(info)GCF_000956335.1

•Plasmodium gonderi(apicomplexans P.gonderi (ATCC 30045 2017))(info)GCF_002157705.1

Plasmodium inui

•Plasmodium inui San Antonio 1(apicomplexans P.inui (San Antonio 1 2014))(info)GCF_000524495.1

Plasmodium knowlesi

•Plasmodium knowlesi(apicomplexans P.knowlesi (2017))(info)GCA_900162085.1

•Plasmodium knowlesi(apicomplexans P.knowlesi (Malayan Strain Pk1 A 2017))(info)GCA_002140095.1

•Plasmodium knowlesi strain H(apicomplexans P.knowlesi strain (H 2020))(info)GCF_000006355.2

Plasmodium ovale

•Plasmodium ovale(malaria parasite P. ovale (PocGH01 2016))(info)GCA_900090035.2

•Plasmodium ovale(malaria parasite P. ovale (PowCR01 2016))(info)GCA_900090025.2

Plasmodium vivax

•Plasmodium vivax(malaria parasite P. vivax (Pv01-19 2023))(info)GCA_949152365.1

•Plasmodium vivax(malaria parasite P. vivax (PvP01 2019))(info)GCA_900093555.2

•Plasmodium vivax(malaria parasite P. vivax (PvSal1 Salvador I 2009))(info)GCF_000002415.2

•Plasmodium vivax(malaria parasite P. vivax (PvSY56 2018))(info)GCA_003402215.1

•Plasmodium vivax(malaria parasite P. vivax (PvW1 2021))(info)GCA_914969965.1

•Plasmodium malariae(Plasmodium malariae (2016))(info)GCF_900090045.1

{418103}

•Plasmodium

•Plasmodium coatneyi(apicomplexans P.coatneyi (Hackeri 2016))(info)GCF_001680005.1

Plasmodium

Plasmodium gaboni

•Plasmodium gaboni(apicomplexans P.gaboni (2021))(info)GCA_900097045.1

•Plasmodium gaboni(apicomplexans P.gaboni (SY75 2016))(info)GCF_001602025.1

Plasmodium reichenowi

•Plasmodium reichenowi(apicomplexans P.reichenowi (2018))(info)GCA_900097025.1

•Plasmodium reichenowi(apicomplexans P.reichenowi (CDC 2014))(info)GCF_000723685.1

•Plasmodium reichenowi(apicomplexans P.reichenowi (SY57 2016))(info)GCF_001601855.1

•Plasmodium sp. DRC-Itaito(apicomplexans P.sp. DRC-Itaito (2020))(info)GCA_900257145.2

•Plasmodium sp. gorilla clade G1(apicomplexans P.sp. gorilla clade G1 (2018))(info)GCA_900095595.1

•Plasmodium sp. gorilla clade G2(apicomplexans P.sp. gorilla clade G2 (2018))(info)GCF_900097015.1

•Plasmodium sp. gorilla clade G3(apicomplexans P.sp. gorilla clade G3 (2018))(info)GCA_900097035.1

Plasmodium falciparum

•Plasmodium falciparum(malaria parasite P. falciparum (7G8 2019))(info)GCA_009761555.1

•Plasmodium falciparum(malaria parasite P. falciparum (GB4 2018))(info)GCA_900632035.1

•Plasmodium falciparum(malaria parasite P. falciparum (HB3 2018))(info)GCA_900631985.1

•Plasmodium falciparum(malaria parasite P. falciparum (KH1 2018))(info)GCA_900632025.1

•Plasmodium falciparum(malaria parasite P. falciparum (KH2 2018))(info)GCA_900632015.1

•Plasmodium falciparum(malaria parasite P. falciparum (NF135.C10 2019))(info)GCA_009761425.1

•Plasmodium falciparum(malaria parasite P. falciparum (NF166 2019))(info)GCA_009761515.1

•Plasmodium falciparum(malaria parasite P. falciparum (NF54 2019))(info)GCA_009761475.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfCD01-2 2018))(info)GCA_900617135.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfDd2-3 2018))(info)GCA_900632045.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfGA01-3 2018))(info)GCA_900632005.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfGN01-3 2018))(info)GCA_900631995.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfKE01-3 2018))(info)GCA_900631975.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfML01-3 2018))(info)GCA_900632085.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfSD01-3 2018))(info)GCA_900632095.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfSN01-3 2018))(info)GCA_900632075.1

•Plasmodium falciparum(malaria parasite P. falciparum (PfTG01-3 2018))(info)GCA_900632065.1

•Plasmodium falciparum(malaria parasite P. falciparum (type strain: I 2018))(info)GCA_900632055.1

Plasmodium falciparum 3D7

•Plasmodium falciparum 3D7(malaria parasite P. falciparum (v5 3D7 2016 refseq))(info)GCF_000002765.5

•Plasmodium falciparum 3D7(malaria parasite P. falciparum (v6 3D7 2016))(info)GCF_000002765.6

{418107}

•Laverania

Plasmodium

•Plasmodium gallinaceum(apicomplexans P.gallinaceum (8A 2016))(info)GCF_900005855.1

•Plasmodium relictum(apicomplexans P.relictum (SGS1 2016))(info)GCF_900005765.1

{418104}

•Haemamoeba

Haemoproteidae

Haemoproteus

•Haemoproteus tartakovskyi(apicomplexans H.tartakovskyi (SISKIN1 2016))(info)GCA_001625125.1

•Chromera velia CCMP2878(C.velia (CCMP2878 2021))(info)GCA_018398765.1

Vitrellaceae

Vitrella

Vitrella brassicaformis

•Vitrella brassicaformis CCMP3155(V.brassicaformis CCMP3155 (2015))(info)GCA_001179505.1

•Ichthyophthirius multifiliis(ciliates I.multifiliis (G5 2011))(info)GCF_000220395.1

Tetrahymenina

Tetrahymenidae

Tetrahymena

Tetrahymena thermophila

•Tetrahymena thermophila SB210(ciliates T.thermophila (SB210 2009))(info)GCF_000189635.1

Peniculida

Parameciidae

Paramecium

Paramecium tetraurelia

•Paramecium tetraurelia(Paramecium tetraurelia (d4-2 2017))(info)GCF_000165425.1

•Paramecium tetraurelia strain d4-2(ciliates P.tetraurelia strain (Stock d4-2 2004))(info)GCF_000141845.1

•Oxytricha trifallax(ciliates Oxytricha trifallax (JRB310 2014))(info)GCA_000711775.1

•Oxytricha trifallax(ciliates Oxytricha trifallax (JRB510 2015))(info)GCA_001297925.1

•Oxytricha trifallax(ciliates Oxytricha trifallax (v2 JRB310 2020))(info)GCA_000295675.2

unclassified Amoebophrya

•Amoebophrya sp. A120(dinoflagellates A.sp. A120 (2021))(info)GCA_905178155.1

•Amoebophrya sp. A25(dinoflagellates A.sp. A25 (2021))(info)GCA_905178165.1

Suessiales

Symbiodiniaceae

Symbiodinium

•Symbiodinium kawagutii(dinoflagellates S.kawagutii (SL-2019 2019))(info)GCA_009767595.1

•Symbiodinium microadriaticum(dinoflagellates S.microadriaticum (2021))(info)GCA_905231925.1

•Symbiodinium necroappetens(dinoflagellates S.necroappetens (2021))(info)GCA_905231915.1

Symbiodinium pilosum

•Symbiodinium pilosum(dinoflagellates S.pilosum (2021))(info)GCA_905231905.1

•Symbiodinium pilosum(dinoflagellates S.pilosum (alternate hap 2024))(info)GCA_964212145.1

•Symbiodinium pilosum(dinoflagellates S.pilosum (primary hap 2024))(info)GCA_964212085.1

unclassified Symbiodinium

•Symbiodinium sp. CCMP2456(dinoflagellates S.sp. CCMP2456 (2021))(info)GCA_905221635.1

•Symbiodinium sp. CCMP2592(dinoflagellates S.sp. CCMP2592 (2021))(info)GCA_905221615.1

•Symbiodinium sp. KB8(dinoflagellates S.sp. KB8 (2021))(info)GCA_905221625.1

Symbiodinium sp. clades

Symbiodinium sp. clade A

Symbiodinium clade A isolates

•Symbiodinium sp. clade A Y106(dinoflagellates S.sp. clade A (Y106 2018))(info)GCA_003297005.1

Cladocopium

unclassified Cladocopium

Cladocopium sp. clade C

Symbiodinium clade C isolates

•Symbiodinium sp. clade C Y103(dinoflagellates S.sp. clade C (Y103 2018))(info)GCA_003297045.1

•Perkinsus chesapeaki(P.chesapeaki (ATCC PRA-425 2020))(info)GCA_013115145.1

Perkinsus marinus

Perkinsus marinus ATCC 50983

•Perkinsus marinus ATCC 50983(P.marinus (ATCC 50983 2009 genbank))(info)GCA_000006405.1

•Perkinsus marinus ATCC 50983(P.marinus (ATCC 50983 2009 refseq))(info)GCF_000006405.1

Perkinsus olseni

•Perkinsus olseni(P.olseni (00978-12 2020))(info)GCA_013115135.1

•Perkinsus olseni(P.olseni (ATCC PRA-179 2020))(info)GCA_013115115.1

•Perkinsus olseni(P.olseni (ATCC PRA-205 2020))(info)GCA_013115895.1

•Perkinsus olseni(P.olseni (ATCC PRA-207 2020))(info)GCA_013115865.1

•Perkinsus olseni(P.olseni (ATCC PRA-31 2020))(info)GCA_013115125.1

•Perkinsus olseni(P.olseni (nz-gsm 2025))(info)GCA_051622615.1

•Blastocystis hominis(B.hominis (Singapore isolate B sub-type 7 2010))(info)GCF_000151665.1

Blastocystis sp. subtypes

•Blastocystis sp. subtype 4(B.sp. subtype 4 (WR1 2014))(info)GCF_000743755.1

unclassified Schizochytrium

•Schizochytrium sp. TIO01(slime nets (TIO01 2019))(info)GCA_004764695.1

Phytophthora nicotianae

•Phytophthora nicotianae INRA-310(black shank of tobacco agent (INRA-310 2013))(info)GCF_000247585.1

•Phytophthora cactorum(downy mildews (10300 2018))(info)GCA_003287315.1

•Phytophthora plurivora(downy mildews (AV1007 2017))(info)GCA_002247145.1

•Phytophthora cinnamomi(downy mildews (GKB4 2021 refseq))(info)GCF_018691715.1

•Phytophthora capsici(downy mildews (LT1534-B 2021))(info)GCA_016618375.1

•Phytophthora sojae(downy mildews (P6497 2011))(info)GCF_000149755.1

•Phytophthora palmivora(downy mildews (sbr112.9 2018))(info)GCA_002911725.1

Phytophthora infestans

•Phytophthora infestans T30-4(potato late blight agent (T30-4 2009))(info)GCF_000142945.1

Phytophthora ramorum

•Phytophthora ramorum(sudden oak death agent (14567 PR-15-019 primary hap 2021))(info)GCA_020800235.1

•Phytophthora ramorum(sudden oak death agent (Pr-102 primary hap 2021 refseq))(info)GCF_020800215.1

Plasmopara

•Plasmopara halstedii(downy mildews (2015))(info)GCF_900000015.1

Hyaloperonospora

Hyaloperonospora arabidopsidis

•Hyaloperonospora arabidopsidis Emoy2(downy mildews (Emoy2 2012))(info)GCA_000173235.2

Peronospora

•Peronospora effusa(downy mildews (R13 2018))(info)GCA_003843895.1

Bremia

Bremia lactucae

•Bremia lactucae(lettuce downy mildew (SF5 2021 genbank))(info)GCA_004359215.2

•Bremia lactucae(lettuce downy mildew (SF5 2021 refseq))(info)GCF_004359215.1

•Pythium arrhenomanes ATCC 12531(oomycetes (ATCC 12531 2013))(info)GCA_000387505.2

Pythium aphanidermatum

•Pythium aphanidermatum DAOM BR444(oomycetes (DAOM BR444 2013))(info)GCA_000387445.2

•Pythium insidiosum(oomycetes (Pi-S 2022))(info)GCA_001029375.2

Globisporangium

Globisporangium ultimum

•Globisporangium ultimum DAOM BR144(oomycetes (DAOM BR144 2010))(info)GCA_000143045.1

Globisporangium ultimum var. sporangiiferum

•Globisporangium ultimum var. sporangiiferum BR650(oomycetes (DAOM BR650 2013))(info)GCA_000387525.2

Globisporangium iwayamae

•Globisporangium iwayamae DAOM BR242034(oomycetes (DAOM BR242034 2013))(info)GCA_000387465.2

Globisporangium irregulare

•Globisporangium irregulare DAOM BR486(oomycetes (DAOM BR486 2013))(info)GCA_000387425.2

Phytopythium

Phytopythium vexans

•Phytopythium vexans DAOM BR484(oomycetes (DAOM BR484 2013))(info)GCA_000387545.2

•Aphanomyces astaci(oomycetes (APO3 2014))(info)GCF_000520075.1

•Aphanomyces euteiches(oomycetes (MF1 2022))(info)GCA_021527665.1

•Aphanomyces invadans(oomycetes (NJM9701 2014))(info)GCF_000520115.1

Saprolegniaceae

Saprolegnia

Saprolegnia parasitica

•Saprolegnia parasitica CBS 223.65(oomycetes (CBS 223.65 2014))(info)GCF_000151545.1

Saprolegnia diclina

•Saprolegnia diclina VS20(oomycetes (VS20 2013))(info)GCF_000281045.1

•Nereocystis luetkeana(brown algae (2023))(info)GCA_031213475.1

Macrocystis

•Macrocystis pyrifera(bull kelp M.pyrifera (CI_03 2023))(info)GCA_031763025.1

Saccharina

•Saccharina latissima(sugar kelp S.latissima (South Norwegian Sea WGS_kelp_146 2023))(info)GCA_034768055.1

•Fistulifera solaris(diatoms F.solaris (JPCC DA0580 2022))(info)GCA_030295235.1

Phaeodactylaceae

Phaeodactylum

Phaeodactylum tricornutum

•Phaeodactylum tricornutum CCAP 1055/1(diatoms P.tricornutum (CCAP 1055/1 2008))(info)GCF_000150955.2

Coscinodiscophyceae

Thalassiosirophycidae

Thalassiosirales

Thalassiosiraceae

Thalassiosira

Thalassiosira pseudonana

•Thalassiosira pseudonana CCMP1335(diatoms T.pseudonana (CCMP1335 2009))(info)GCF_000149405.2

Nannochloropsis oculata

•Nannochloropsis oculata CCMP525(marine microalga N.oculata (CCMP525 2019))(info)GCA_004335455.1

Nannochloropsis gaditana

•Nannochloropsis gaditana CCMP526(N.gaditana (CCMP526 2012))(info)GCF_000240725.1

•Aureococcus anophagefferens(pelagophytes A.anophagefferens (CCMP1984 2011))(info)GCF_000186865.1

•Giardia duodenalis(diplomonads (beaver 2020))(info)GCA_011634555.1

•Giardia duodenalis(diplomonads (CIA 2022))(info)GCA_022985015.1

•Giardia duodenalis(diplomonads (DH 2013))(info)GCA_000498715.1

•Giardia duodenalis(diplomonads (DID 2022))(info)GCA_022985025.1

•Giardia duodenalis(diplomonads (GS 2013))(info)GCA_000498735.1

•Giardia duodenalis(diplomonads (GS 2020))(info)GCA_011634595.1

•Giardia duodenalis(diplomonads (v2 WB C6 2019))(info)GCF_000002435.2

•Giardia duodenalis(diplomonads (WB 2020))(info)GCA_011634545.1

•Giardia duodenalis assemblage A(diplomonads (AS175 2013))(info)GCA_001493575.1

•Giardia duodenalis assemblage B(diplomonads (BAH15c1 2016))(info)GCA_001543975.1

•Giardia duodenalis ATCC 50581(diplomonads (GS/M clone H7 2009))(info)GCA_000182405.1

•Giardia lamblia P15(diplomonads (P15 2010))(info)GCA_000182665.1

•Giardia muris(diplomonads (Roberts-Thomson 2019))(info)GCA_006247105.1

Hexamitinae

Spironucleus

•Spironucleus salmonicida(diplomonads (ATCC 50377 2021))(info)GCF_000497125.1

Histomonas meleagridis

•Histomonas meleagridis(H.meleagridis (2922-C6/04-10x 2021 genbank))(info)GCA_020186115.1

•Histomonas meleagridis(H.meleagridis (2922-C6/04-10x 2021 refseq))(info)GCF_020186115.1

•Histomonas meleagridis(H.meleagridis (2922-C6/04-290x 2021))(info)GCA_020184695.1

Tritrichomonadidae

Tritrichomonas

Tritrichomonas foetus

•Tritrichomonas foetus(T.foetus (K 2016 genbank))(info)GCA_001839685.2

•Tritrichomonas foetus(T.foetus (K 2016 refseq))(info)GCF_001839685.1

Trichomonadida

Trichomonadidae

Trichomonas

Trichomonas vaginalis

Trichomonas vaginalis G3

•Trichomonas vaginalis G3(trichomonads (G3 2022 genbank))(info)GCA_000002825.3

•Trichomonas vaginalis G3(trichomonads (G3 2022))(info)GCA_026262505.1

•Trichomonas vaginalis G3(trichomonads (G3; ATCC PRA-98 2007))(info)GCF_000002825.2

•Trichomonas vaginalis G3(Trichomonas vaginalis (G3 2022))(info)GCF_026262505.1

•Trichomonas tenax(trichomonads (NIH4 ATCC 30207 2019))(info)GCA_900231805.1

Monocercomonoides exilis

•Monocercomonoides exilis(M.exilis (PA203 2021 genbank))(info)GCA_001643675.2

•Monocercomonoides exilis(M.exilis (PA203 2021 refseq))(info)GCF_001643675.1

•Kappaphycus alvarezii(K.alvarezzi red algae (kp 2020))(info)GCA_002205965.3

Cyanidioschyzon merolae

•Cyanidioschyzon merolae strain 10D(red algae C.merolae (10D 2007))(info)GCA_000091205.1

•Unknown_876063(moth O.sylvanus)(info)GCA_905404295.1